Gene: Solyc10g039190.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc10g039190.2
  • Transcript Identifier Solyc10g039190.2.1
  • Gene Type Coding gene
  • Location SL4.0ch10 : 20070499-20078159 : positive

Gene Family Information

  • ID HOM05D005316
  • #Genes/#Species 143/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc10g039190.2.1
  • uniprot A0A3Q7J9A4
  • gene_id Solyc10g039190

Descriptions

  • Description WD40 repeat (AHRD V3.3 *** A0A200R5H2_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030490
IBA
GOA Databasematuration of SSU-rRNA

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0030515
IBA
GOA DatabasesnoRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IEA
GOA Databasenucleolus
GO:0034388
IBA
GOA DatabasePwp2p-containing subcomplex of 90S preribosome
GO:0032040
IBA
GOA Databasesmall-subunit processome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007148 Small-subunit processome, Utp12
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily
Mapman id Description
17.1.3.2.1.3.3 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.UtpB module.assembly factor (UTP12)