Gene: Solyc10g018350.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc10g018350.2
  • Transcript Identifier Solyc10g018350.2.1
  • Gene Type Coding gene
  • Location SL4.0ch10 : 7158360-7164850 : negative

Gene Family Information

  • ID HOM05D000584
  • #Genes/#Species 950/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc10g018350.2.1
  • uniprot A0A3Q7IDY6
  • gene_id Solyc10g018350

Descriptions

  • Description Vesicle-associated protein 1-4 (AHRD V3.3 *** A0A2G2VSJ1_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090158
IBA
GOA Databaseendoplasmic reticulum membrane organization
GO:0061817
IBA
GOA Databaseendoplasmic reticulum-plasma membrane tethering
GO:0006605
ISO
PLAZA Integrative Orthologyprotein targeting AT2G45140
GO:0046907
ISO
PLAZA Integrative Orthologyintracellular transport AT3G60600

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G60600

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005789
IBA
IEA
GOA Databaseendoplasmic reticulum membrane
GO:0005789
IEA
InterProendoplasmic reticulum membrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005886
IBA
GOA Databaseplasma membrane
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G60600
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G60600
GO:0000326
ISO
PLAZA Integrative Orthologyprotein storage vacuole AT3G60600
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT3G60600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008962 PapD-like superfamily
IPR013783 Immunoglobulin-like fold
IPR016763 Vesicle-associated membrane-protein-associated protein
IPR000535 Major sperm protein (MSP) domain
Mapman id Description
20.7.1 Cytoskeleton organisation.endoplasmic reticulum-cytoskeleton-plasma membrane interface.contact site protein (VAP27)