Gene: Solyc10g007260.3

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc10g007260.3
Transcript Identifier Solyc10g007260.3.1
Gene Type Coding gene
Location SL4.0ch10 : 1553953-1558816 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000050
#Genes/#Species 4474/100
Phylogenetic origin

ID ORTHO05D002706
#Genes/#Species 268/100
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid Solyc10g007260.3.1
uniprot K4CXQ6
gene_id Solyc10g007260

Descriptions

Short descriptions
Ortholog descriptions

Description Ubiquitin-conjugating enzyme (AHRD V3.3 *** H6VUT0_9FABA)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0070534	IBA	GOA Database	protein K63-linked ubiquitination
GO:0006301	IBA	GOA Database	postreplication repair
GO:0000209	IBA	GOA Database	protein polyubiquitination
GO:0010053	ISO	PLAZA Integrative Orthology	root epidermal cell differentiation	AT1G16890
GO:0010039	ISO	PLAZA Integrative Orthology	response to iron ion	AT1G16890
GO:0006511	ISO	PLAZA Integrative Orthology	ubiquitin-dependent protein catabolic process	AT1G16890

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005524	IEA	GOA Database	ATP binding
GO:0000166	IEA	GOA Database	nucleotide binding
GO:0016740	IEA	GOA Database	transferase activity
GO:0061631	IBA	GOA Database	ubiquitin conjugating enzyme activity
GO:0004842	ISO	PLAZA Integrative Orthology	ubiquitin-protein transferase activity	AT1G16890
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G16890

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IBA	GOA Database	nucleus
GO:0031372	ISO	PLAZA Integrative Orthology	UBC13-MMS2 complex	AT1G16890

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR016135	Ubiquitin-conjugating enzyme/RWD-like
IPR000608	Ubiquitin-conjugating enzyme E2

Mapman id	Description
19.2.2.1.3	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-conjugating E2 protein (UBC)