Gene: Solyc10g006270.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc10g006270.4
  • Transcript Identifier Solyc10g006270.4.1
  • Gene Type Coding gene
  • Location SL4.0ch10 : 824189-826886 : negative

Gene Family Information

  • ID HOM05D000698
  • #Genes/#Species 816/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc10g006270.4.1
  • uniprot A0A3Q7IBE4
  • gene_id Solyc10g006270

Descriptions

  • Description Autophagy-related protein (AHRD V3.3 *** A0A2G3C2V6_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006914
IEA
GOA Databaseautophagy
GO:0006995
IBA
GOA Databasecellular response to nitrogen starvation
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT4G21980

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G04620

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016020
IEA
GOA Databasemembrane
GO:0061908
ISO
PLAZA Integrative Orthologyphagophore AT4G21980
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G21980
GO:0005776
ISO
PLAZA Integrative Orthologyautophagosome AT4G21980

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR004241 Autophagy protein Atg8 ubiquitin-like
IPR029071 Ubiquitin-like domain superfamily
Mapman id Description
19.3.3.4.1 Protein homeostasis.autophagy.phagophore expansion.ATG8-phosphatidylethanolamine conjugation system.ubiquitin-fold protein (ATG8)