Gene: Solyc10g005800.3

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc10g005800.3
Transcript Identifier Solyc10g005800.3.1
Gene Type Coding gene
Location SL4.0ch10 : 519544-522548 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D003885
#Genes/#Species 179/97
Phylogenetic origin

ID ORTHO05D004623
#Genes/#Species 175/97
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid Solyc10g005800.3.1
uniprot A0A3Q7I9N9
gene_id Solyc10g005800

Descriptions

Short descriptions
Ortholog descriptions

Description Cwf15 / Cwc15 cell cycle control family protein (AHRD V3.3 *** Q9LK52_ARATH)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000398	IEA	GOA Database	mRNA splicing, via spliceosome
GO:0000398	IEA	InterPro	mRNA splicing, via spliceosome
GO:0006397	IEA	GOA Database	mRNA processing
GO:0008380	IEA	GOA Database	RNA splicing
GO:0045292	IBA	GOA Database	mRNA cis splicing, via spliceosome

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003723	IBA	GOA Database	RNA binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT3G13200

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005681	IEA	GOA Database	spliceosomal complex
GO:0005681	IEA	InterPro	spliceosomal complex
GO:0071013	IBA	GOA Database	catalytic step 2 spliceosome
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT3G13200
GO:0000974	ISO	PLAZA Integrative Orthology	Prp19 complex	AT3G13200

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR006973	Pre-mRNA-splicing factor Cwf15/Cwc15

Mapman id	Description
35.1	not assigned.annotated