Gene: AT3G13200
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G13200
- Transcript Identifier AT3G13200.1
- Gene Type Coding gene
- Location Chr3 : 4242239-4243976 : positive
Gene Family Information
- ID HOM05D003885
- #Genes/#Species 179/97
- Phylogenetic origin
- ID ORTHO05D004623
- #Genes/#Species 175/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G13200.1
- symbol EMB2769
- full_name EMBRYO DEFECTIVE 2769
- uniprot Q9LK52
Descriptions
- Description Cwf15 / Cwc15 cell cycle control family protein
- Computational description EMBRYO DEFECTIVE 2769 (EMB2769); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: nuclear mRNA splicing, via spliceosome; LOCATED IN: spliceosomal complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cwf15/Cwc15 cell cycle control protein (InterPro:IPR006973); Has 4871 Blast hits to 3670 proteins in 321 species: Archae - 3; Bacteria - 193; Metazoa - 1657; Fungi - 645; Plants - 225; Viruses - 150; Other Eukaryotes - 1998 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045292 | IBA | Gene Ontology | mRNA cis splicing, via spliceosome | 1 |
| GO:0006397 | IEA | GOA Database | mRNA processing | |
| GO:0008380 | IEA | GOA Database | RNA splicing | |
| GO:0000398 | IEA | GOA Database | mRNA splicing, via spliceosome | |
| GO:0000398 | IEA | InterPro | mRNA splicing, via spliceosome |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 2 |
| GO:0003723 | IBA | Gene Ontology | RNA binding | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IDA ISM | Gene Ontology | nucleus | 3 |
| GO:0000974 | IDA | Gene Ontology | Prp19 complex | 3 |
| GO:0071013 | IBA | Gene Ontology | catalytic step 2 spliceosome | 1 |
| GO:0005681 | IEA | GOA Database | spliceosomal complex | |
| GO:0005681 | IEA | InterPro | spliceosomal complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006973 | Pre-mRNA-splicing factor Cwf15/Cwc15 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |