Gene: Solyc09g047870.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g047870.4
  • Transcript Identifier Solyc09g047870.4.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 30923830-30931586 : negative

Gene Family Information

  • ID HOM05D006330
  • #Genes/#Species 126/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g047870.4.1
  • uniprot A0A3Q7IXB2
  • gene_id Solyc09g047870

Descriptions

  • Description 23S rRNA (Cytidine1920-2'-O)/16S rRNA (Cytidine1409-2'-O)-methyltransferase (AHRD V3.3 *** A0A2I0WJW4_9ASPA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032259
IEA
GOA Databasemethylation
GO:0032259
IEA
InterPromethylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0008168
IEA
InterPromethyltransferase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
IPR002942 RNA-binding S4 domain
IPR036986 RNA-binding S4 domain superfamily
IPR004538 Haemolysin A /rRNA methyltransferase TlyA
IPR002877 Ribosomal RNA methyltransferase FtsJ domain
Mapman id Description
35.1 not assigned.annotated