Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc09g047870.4 Solanum lycopersicum HOM05D006330 ORTHO05D008013 4.7e-155 551.2 288 100.0
Sopen09g015980 Solanum pennellii HOM05D006330 ORTHO05D008013 7.8e-126 454.1 244 98.0
Peaxi162Scf00841g00112 Petunia axillaris HOM05D006330 ORTHO05D008013 9.9e-113 410.6 259 84.6
Nitab4.5_0010469g0010 Nicotiana tabacum HOM05D006330 ORTHO05D008013 3.9e-109 398.7 249 85.9
Nitab4.5_0000038g0340 Nicotiana tabacum HOM05D006330 ORTHO05D008013 5.1e-109 398.3 248 86.7
Cc01_g15880 Coffea canephora HOM05D006330 ORTHO05D008013 5.5e-95 351.7 250 77.2
Dinv28793 Davidia involucrata HOM05D006330 ORTHO05D008013 3.0e-93 345.9 250 76.0
TAR362G0826 Trochodendron aralioides HOM05D006330 ORTHO05D008013 3.0e-93 345.9 242 78.1
Lj2C1112G6 Lonicera japonica HOM05D006330 ORTHO05D008013 2.5e-92 342.8 203 86.7
MBI10_g35385_MAGBIO Magnolia biondii HOM05D006330 ORTHO05D008013 3.3e-92 342.4 244 76.2
GSVIVG01001532001 Vitis vinifera HOM05D006330 ORTHO05D008013 5.6e-92 341.7 241 76.3
CANSAT01G2136 Cannabis sativa HOM05D006330 ORTHO05D008013 1.6e-91 340.1 206 84.5
Lsat_1_v5_gn_9_16880 Lactuca sativa HOM05D006330 ORTHO05D008013 3.7e-91 339.0 203 85.7
HanXRQChr07g0190561 Helianthus annuus HOM05D006330 ORTHO05D008013 4.8e-91 338.6 241 75.5
PSO675G8704 Papaver somniferum HOM05D006330 ORTHO05D008013 4.8e-91 338.6 247 74.9
Thecc.01G207700 Theobroma cacao HOM05D006330 ORTHO05D008013 1.1e-90 337.4 225 78.7
Actinidia23802 Actinidia chinensis HOM05D006330 ORTHO05D008013 1.4e-90 337.0 205 84.4
Actinidia34530 Actinidia chinensis HOM05D006330 ORTHO05D008013 1.8e-90 336.7 236 77.1
QL09p047707 Quercus lobata HOM05D006330 ORTHO05D008013 2.4e-90 336.3 237 76.4
RcHm_v2.0_Chr6g0282221 Rosa chinensis HOM05D006330 ORTHO05D008013 5.3e-90 335.1 241 74.3
FvH4_2g17480 Fragaria vesca HOM05D006330 ORTHO05D008013 6.9e-90 334.7 241 73.9
FAN15G1514 Fragaria x ananassa HOM05D006330 ORTHO05D008013 6.9e-90 334.7 241 73.9
Gorai.007G161200 Gossypium raimondii HOM05D006330 ORTHO05D008013 6.9e-90 334.7 204 84.8
Haze_03505 Corylus avellana HOM05D006330 ORTHO05D008013 2.6e-89 332.8 202 83.2
Gohir.A11G143900 Gossypium hirsutum HOM05D006330 ORTHO05D008013 4.5e-89 332.0 204 84.3
MD10G1148200 Malus domestica HOM05D006330 ORTHO05D008013 5.8e-89 331.6 239 76.6
Nn7g37444 Nelumbo nucifera HOM05D006330 ORTHO05D008013 5.8e-89 331.6 244 73.8
Cfa010572 Carpinus fangiana HOM05D006330 ORTHO05D008013 7.6e-89 331.3 202 83.2
Potri.014G175500 Populus trichocarpa HOM05D006330 ORTHO05D008013 7.6e-89 331.3 207 82.6
Sc05g0001630 Simmondsia chinensis HOM05D006330 ORTHO05D008013 7.6e-89 331.3 240 75.0
Ciclev10015989m.g Citrus clementina HOM05D006330 ORTHO05D008013 1.0e-88 330.9 250 72.8
Atru.chr6.3528 Acer truncatum HOM05D006330 ORTHO05D008013 1.3e-88 330.5 246 74.0
ECA247G1307 Erigeron canadensis HOM05D006330 ORTHO05D008013 1.3e-88 330.5 203 82.8
Manes.12G055500 Manihot esculenta HOM05D006330 ORTHO05D008013 1.3e-88 330.5 246 74.0
Gohir.D11G150300 Gossypium hirsutum HOM05D006330 ORTHO05D008013 1.7e-88 330.1 240 75.8
FAN24G2605 Fragaria x ananassa HOM05D006330 ORTHO05D008013 3.8e-88 328.9 241 73.0
CiPaw.13G055600 Carya illinoinensis HOM05D006330 ORTHO05D008013 1.1e-87 327.4 205 82.0
Sabra14G0134300 Salix brachista HOM05D006330 ORTHO05D008013 1.4e-87 327.0 259 72.6
SalBow3G0290 Salvia bowleyana HOM05D006330 ORTHO05D008013 1.4e-87 327.0 203 82.8
Ca_23158_v3 Cicer arietinum L. HOM05D006330 ORTHO05D008013 1.9e-87 326.6 204 80.4
VMungo0331G1131 Vigna mungo HOM05D006330 ORTHO05D008013 1.9e-87 326.6 204 80.9
CDE02G1604 Ceratophyllum demersum HOM05D006330 ORTHO05D008013 3.2e-87 325.9 215 80.0
Glyma.03G097100 Glycine max HOM05D006330 ORTHO05D008013 3.2e-87 325.9 244 71.3
Phvul.010G036400 Phaseolus vulgaris HOM05D006330 ORTHO05D008013 4.2e-87 325.5 204 80.4
SGA_v2.0_scaffold231G43447 Striga asiatica HOM05D006330 ORTHO05D008013 4.2e-87 325.5 226 75.7
MSTRG.21296 Avicennia marina HOM05D006330 ORTHO05D008013 7.1e-87 324.7 235 74.0
Migut.D00775 Erythranthe guttata HOM05D006330 ORTHO05D008013 7.1e-87 324.7 244 73.0
DCAR_004774 Daucus carota HOM05D006330 ORTHO05D008013 1.6e-86 323.6 187 87.2
Eucgr.K02361 Eucalyptus grandis HOM05D006330 ORTHO05D008013 1.6e-86 323.6 206 79.6
TWI36G1481 Tripterygium wilfordii HOM05D006330 ORTHO05D008013 1.6e-86 323.6 246 74.4
HPP92_007591 Vanilla planifolia HOM05D006330 ORTHO05D008013 1.6e-86 323.6 202 81.2
Duzib133G1456 Durio zibethinus HOM05D006330 ORTHO05D008013 2.7e-86 322.8 235 73.6
Glyma.07G124200 Glycine max HOM05D006330 ORTHO05D008013 2.7e-86 322.8 204 79.9
Prupe.8G187200 Prunus persica HOM05D006330 ORTHO05D008013 2.7e-86 322.8 240 72.5
Aqoxy2G02383 Aquilegia oxysepala HOM05D006330 ORTHO05D008013 3.5e-86 322.4 254 70.5
ATR0743G141 Amborella trichopoda HOM05D006330 ORTHO05D008013 4.6e-86 322.0 227 78.4
arahy.Tifrunner.gnm1.ann1.3RIK1P Arachis hypogaea HOM05D006330 ORTHO05D008013 4.6e-86 322.0 202 79.7
Lalb_Chr12g0210221 Lupinus albus HOM05D006330 ORTHO05D008013 4.6e-86 322.0 240 71.2
Psat4g208240 Pisum sativum HOM05D006330 ORTHO05D008013 6.0e-86 321.6 229 73.4
Lj3g0006219 Lotus japonicus HOM05D006330 ORTHO05D008013 1.0e-85 320.9 247 70.4
PGR044G2230 Punica granatum HOM05D006330 ORTHO05D008013 1.0e-85 320.9 202 83.2
TPR.G17377 Trifolium pratense HOM05D006330 ORTHO05D008013 1.3e-85 320.5 229 72.5
THA.LOC104804704 Tarenaya hassleriana HOM05D006330 ORTHO05D008013 1.8e-85 320.1 206 80.1
arahy.Tifrunner.gnm1.ann1.84ZR2Z Arachis hypogaea HOM05D006330 ORTHO05D008013 2.3e-85 319.7 202 78.7
Zm00001eb168340 Zea mays HOM05D006330 ORTHO05D008013 1.1e-84 317.4 202 80.2
Medtr8g010130 Medicago truncatula HOM05D006330 ORTHO05D008013 3.3e-84 315.8 204 77.9
Os11g0247400 Oryza sativa ssp. japonica HOM05D006330 ORTHO05D008013 3.3e-84 315.8 202 81.2
EL10Ac5g10587 Beta vulgaris HOM05D006330 ORTHO05D008013 4.3e-84 315.5 237 70.5
Oeu049580.1 Olea europaea HOM05D006330 ORTHO05D008013 2.8e-83 312.8 206 79.6
ClCG09G008360 Citrullus lanatus HOM05D006330 ORTHO05D008013 6.3e-83 311.6 188 83.0
Ciclev10018050m.g Citrus clementina HOM05D006330 ORTHO05D008013 1.8e-82 310.1 194 82.5
Rhsim01G0247700 Rhododendron simsii HOM05D006330 ORTHO05D008013 5.3e-82 308.5 187 83.4
MELO3C021126.2 Cucumis melo HOM05D006330 ORTHO05D008013 6.9e-82 308.1 206 77.7
CsaV3_7G026730 Cucumis sativus L. HOM05D006330 ORTHO05D008013 9.0e-82 307.8 206 77.2
AUR62008069 Chenopodium quinoa HOM05D006330 ORTHO05D008013 2.0e-81 306.6 188 81.4
Sed0009827 Sechium edule HOM05D006330 ORTHO05D008013 4.5e-81 305.4 211 75.8
vmacro14689 Vaccinium macrocarpon HOM05D006330 ORTHO05D008013 8.5e-80 301.2 200 77.5
Aa31sc18G40 Aethionema arabicum HOM05D006330 ORTHO05D008013 4.2e-79 298.9 206 74.3
Hma1.2p1_0161F.1_g071650 Hydrangea macrophylla HOM05D006330 ORTHO05D008013 9.3e-79 297.7 187 81.8
Carub.0003s2579 Capsella rubella HOM05D006330 ORTHO05D008013 1.1e-76 290.8 204 73.0
CARHR101770 Cardamine hirsuta HOM05D006330 ORTHO05D008013 2.2e-75 286.6 210 70.0
AL3G41590 Arabidopsis lyrata HOM05D006330 ORTHO05D008013 2.8e-75 286.2 204 71.6
Sp3g22990 Schrenkiella parvula HOM05D006330 ORTHO05D008013 4.8e-75 285.4 243 65.8
BcaB08g34453 Brassica carinata HOM05D006330 ORTHO05D008013 1.1e-74 284.3 204 72.1
Thhalv10002617m.g Eutrema salsugineum HOM05D006330 ORTHO05D008013 1.1e-74 284.3 245 65.3
BcaC01g03225 Brassica carinata HOM05D006330 ORTHO05D008013 1.4e-74 283.9 245 66.5
C03p54570 Brassica napus HOM05D006330 ORTHO05D008013 1.4e-74 283.9 245 66.5
BolC3t17744H Brassica oleracea HOM05D006330 ORTHO05D008013 1.4e-74 283.9 245 66.5
A03p44190 Brassica napus HOM05D006330 ORTHO05D008013 1.8e-74 283.5 245 66.5
BraA03t13548Z Brassica rapa HOM05D006330 ORTHO05D008013 1.8e-74 283.5 245 66.5
AT3G25470 Arabidopsis thaliana HOM05D006330 ORTHO05D008013 2.4e-74 283.1 204 70.6
BcaC06g35817 Brassica carinata HOM05D006330 ORTHO05D008013 5.3e-74 282.0 244 66.0
Hund09482 Selenicereus undatus HOM05D006330 ORTHO05D008013 5.3e-74 282.0 247 64.4
A07p06930 Brassica napus HOM05D006330 ORTHO05D008013 3.4e-73 279.3 244 64.8
BraA07t28484Z Brassica rapa HOM05D006330 ORTHO05D008013 3.4e-73 279.3 244 64.8
Mapoly0006s0124 Marchantia polymorpha HOM05D006330 ORTHO05D008013 3.4e-73 279.3 213 67.1
BolC7t41520H Brassica oleracea HOM05D006330 ORTHO05D008013 1.3e-72 277.3 245 65.7
C07p10530 Brassica napus HOM05D006330 ORTHO05D008013 2.2e-72 276.6 245 65.7
CBR_g60689 Chara braunii HOM05D006330 ORTHO05D008013 2.5e-71 273.1 194 73.7
COL.COLO4_34269 Corchorus olitorius HOM05D006330 ORTHO05D008013 2.5e-71 273.1 161 87.6
Pp3c24_1560 Physcomitrium patens HOM05D006330 ORTHO05D008013 8.8e-69 264.6 188 69.7
AUR62028646 Chenopodium quinoa HOM05D006330 ORTHO05D008013 1.2e-65 254.2 162 79.0
CAN.G253.5 Capsicum annuum HOM05D006330 ORTHO05D008013 1.0e-61 241.1 130 94.6
CSS0004044 Camellia sinensis var. sinensis HOM05D006330 ORTHO05D008013 5.2e-61 238.8 186 71.0
SMO141G0006 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 1.1e-60 237.7 200 62.5
Cpa.g.sc8.41 Carica papaya HOM05D006330 ORTHO05D008013 1.2e-57 227.6 131 87.8
SMO186G0001 Selaginella moellendorffii HOM05D006330 ORTHO05D008013 2.6e-57 226.5 191 61.8
MCO07G099 Micromonas commoda HOM05D006330 ORTHO05D008013 7.7e-57 224.9 186 63.4
FAN27G2337 Fragaria x ananassa HOM05D006330 ORTHO05D008013 9.4e-55 218.0 239 56.9
PSO732G0743 Papaver somniferum HOM05D006330 ORTHO05D008013 1.0e-53 214.5 127 88.2
BcaB06g26747 Brassica carinata HOM05D006330 ORTHO05D008013 1.8e-53 213.8 246 55.3
Cre10.g428900 Chlamydomonas reinhardtii HOM05D006330 ORTHO05D008013 9.1e-50 201.4 190 61.6
HanXRQChr07g0198371 Helianthus annuus HOM05D006330 ORTHO05D008013 2.9e-48 196.4 141 77.3
SEGI_37995 Sequoiadendron giganteum HOM05D006330 ORTHO05D008013 1.4e-45 187.6 116 75.9
PRCOL_00000451 Prasinoderma coloniale HOM05D006330 ORTHO05D008013 1.5e-39 167.5 237 44.7
AagrBONN_evm.TU.Sc2ySwM_368.2380 Anthoceros agrestis HOM05D006330 ORTHO05D008013 2.1e-38 163.7 116 66.4
PSO675G8411 Papaver somniferum HOM05D006330 ORTHO05D008013 2.8e-38 163.3 95 81.1
arahy.Tifrunner.gnm1.ann1.VBTZ6V Arachis hypogaea HOM05D006330 ORTHO05D008013 6.1e-38 162.2 112 68.8
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 2.2e-27 127.1 77 77.9
BcaB06g26875 Brassica carinata HOM05D006330 ORTHO05D008013 5.2e-13 79.3 64 62.5
RcHm_v2.0_Chr5g0065021 Rosa chinensis HOM05D006330 ORTHO05D008013 2.3e-08 63.9 45 68.9


User provided reference genes

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