Gene: Solyc09g014980.4
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc09g014980.4
- Transcript Identifier Solyc09g014980.4.1
- Gene Type Coding gene
- Location SL4.0ch09 : 7395313-7403567 : positive
Gene Family Information
- ID HOM05D001720
- #Genes/#Species 376/94
- Phylogenetic origin
- ID ORTHO05D001813
- #Genes/#Species 351/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc09g014980.4.1
- uniprot A0A3Q7HZK7
- gene_id Solyc09g014980
Descriptions
- Description Protein SCAR4 (AHRD V3.3 *** A0A2G3BKZ2_CAPCH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051127 | ISO | PLAZA Integrative Orthology | positive regulation of actin nucleation | AT5G01730 |
| GO:0098609 | ISO | PLAZA Integrative Orthology | cell-cell adhesion | AT2G38440 |
| GO:0010090 | ISO | PLAZA Integrative Orthology | trichome morphogenesis | AT2G38440 |
| GO:0010091 | ISO | PLAZA Integrative Orthology | trichome branching | AT2G38440 |
| GO:0045010 | ISO | PLAZA Integrative Orthology | actin nucleation | AT2G38440 |
| GO:0030036 | IBA IEA | GOA Database | actin cytoskeleton organization | |
| GO:0030036 | IEA | InterPro | actin cytoskeleton organization | |
| GO:2000601 | IBA | GOA Database | positive regulation of Arp2/3 complex-mediated actin nucleation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G01730 |
| GO:0034237 | IBA | GOA Database | protein kinase A regulatory subunit binding | |
| GO:0071933 | IBA | GOA Database | Arp2/3 complex binding | |
| GO:0003779 | IEA | GOA Database | actin binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031209 | ISO | PLAZA Integrative Orthology | SCAR complex | AT5G01730 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT2G38440 |
| GO:0010287 | ISO | PLAZA Integrative Orthology | plastoglobule | AT5G01730 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G01730 |
| GO:0005856 | IEA | GOA Database | cytoskeleton | |
| GO:0005856 | IEA | InterPro | cytoskeleton | |
| GO:0005737 | IEA | GOA Database | cytoplasm |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR028288 | SCAR/WAVE family |
| Mapman id | Description |
|---|---|
| 20.2.2.2.4 | Cytoskeleton organisation.microfilament network.actin polymerisation.SCAR/WAVE ARP2/3-activating complex.component SCAR |