Gene: Solyc09g008330.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc09g008330.3
  • Transcript Identifier Solyc09g008330.3.1
  • Gene Type Coding gene
  • Location SL4.0ch09 : 1829013-1838373 : negative

Gene Family Information

  • ID HOM05D004644
  • #Genes/#Species 157/89
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc09g008330.3.1
  • uniprot A0A3Q7HWT2
  • gene_id Solyc09g008330

Descriptions

  • Description Zinc finger, RING/FYVE/PHD-type (AHRD V3.3 *-* A0A2U1MK75_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IBA
IEA
GOA Databaseprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:0036297
IEA
GOA Databaseinterstrand cross-link repair
GO:0036297
IEA
InterProinterstrand cross-link repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0061630
IBA
GOA Databaseubiquitin protein ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001841 Zinc finger, RING-type
IPR037381 E3 ubiquitin-protein ligase RFWD3
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
35.1 not assigned.annotated