Gene: Solyc08g081310.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g081310.4
  • Transcript Identifier Solyc08g081310.4.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 62497277-62497859 : negative

Gene Family Information

  • ID HOM05D001831
  • #Genes/#Species 358/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g081310.4.1
  • uniprot A0A3Q7HUB3
  • gene_id Solyc08g081310

Descriptions

  • Description Histone deacetylase complex subunit (AHRD V3.3 *-* A8MR31_ARATH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IBA
GOA Databaseregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003712
IBA
GOA Databasetranscription coregulator activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0000118
IBA
GOA Databasehistone deacetylase complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR038291 SAP30, C-terminal domain superfamily
IPR024145 Histone deacetylase complex subunit SAP30/SAP30-like
IPR025718 Histone deacetylase complex subunit SAP30, Sin3 binding domain
Mapman id Description
12.3.2.1.1.2.4 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.SNL-HDA19 histone deacetylase complex.associated component SAP30