Gene: Solyc08g077960.3

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc08g077960.3
Transcript Identifier Solyc08g077960.3.1
Gene Type Coding gene
Location SL4.0ch08 : 59951767-59958047 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002196
#Genes/#Species 306/96
Phylogenetic origin

ID ORTHO05D002565
#Genes/#Species 279/96
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid Solyc08g077960.3.1
uniprot A0A3Q7HSL0
gene_id Solyc08g077960

Descriptions

Short descriptions
Ortholog descriptions

Description GATA transcription factor 26 (AHRD V3.3 *** A0A2G2XLP4_CAPBA)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006355	IEA	GOA Database	regulation of transcription, DNA-templated
GO:0006355	IEA	InterPro	regulation of transcription, DNA-templated

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008270	IEA	GOA Database	zinc ion binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0043565	IEA	GOA Database	sequence-specific DNA binding
GO:0043565	IEA	InterPro	sequence-specific DNA binding
GO:0046872	IEA	GOA Database	metal ion binding
GO:0000976	ISO	PLAZA Integrative Orthology	transcription cis-regulatory region binding	AT4G17570

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	IEA	GOA Database	nucleus

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR044589	GATA transcription factor 26/27
IPR000679	Zinc finger, GATA-type
IPR038108	RPN13, DEUBAD domain superfamily
IPR028020	ASX, DEUBAD domain
IPR013088	Zinc finger, NHR/GATA-type

Mapman id	Description
15.5.1.3.3	RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.GATA trancription factor families.transcription factor (D-GATA)