Gene: Solyc08g066580.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g066580.4
  • Transcript Identifier Solyc08g066580.4.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 53399429-53417168 : negative

Gene Family Information

  • ID HOM05D004619
  • #Genes/#Species 157/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g066580.4.1
  • uniprot A0A3Q7HR18
  • gene_id Solyc08g066580

Descriptions

  • Description Nuclear pore complex protein NUP85 (AHRD V3.3 *** A0A2G2W614_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0051028
IEA
GOA DatabasemRNA transport
GO:0015031
IEA
GOA Databaseprotein transport
GO:0045893
IBA
GOA Databasepositive regulation of transcription, DNA-templated
GO:0006406
IBA
GOA DatabasemRNA export from nucleus
GO:0006606
IBA
GOA Databaseprotein import into nucleus
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT4G32910

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017056
IBA
IEA
GOA Databasestructural constituent of nuclear pore
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G32910

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031080
IBA
IEA
GOA Databasenuclear pore outer ring
GO:0031965
IEA
GOA Databasenuclear membrane
GO:0005643
IEA
GOA Databasenuclear pore
GO:0016020
IEA
GOA Databasemembrane
GO:0005634
IEA
GOA Databasenucleus
GO:0005635
ISO
PLAZA Integrative Orthologynuclear envelope AT4G32910

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011502 Nucleoporin Nup85-like
Mapman id Description
23.5.1.1.1.5 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.scaffold nucleoporin (NUP75/85)