Gene: AT4G32910
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G32910
- Transcript Identifier AT4G32910.1
- Gene Type Coding gene
- Location Chr4 : 15881364-15885210 : positive
Gene Family Information
- ID HOM05D004619
- #Genes/#Species 157/98
- Phylogenetic origin
- ID ORTHO05D005738
- #Genes/#Species 153/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT4G32910.1
- uniprot Q8RXH2
Descriptions
- Description nuclear pore complex Nup85-like protein
- Computational description CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006406 | IMP IBA | Gene Ontology | mRNA export from nucleus | 1 2 |
| GO:0009737 | IMP | Gene Ontology | response to abscisic acid | 3 |
| GO:0006606 | IBA | Gene Ontology | protein import into nucleus | 1 |
| GO:0045893 | IBA | Gene Ontology | positive regulation of transcription, DNA-templated | 1 |
| GO:0051028 | IEA | GOA Database | mRNA transport | |
| GO:0015031 | IEA | GOA Database | protein transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 4 |
| GO:0017056 | IBA | Gene Ontology | structural constituent of nuclear pore | 1 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0005635 | IEA | GOA Database | nuclear envelope | |
| GO:0005635 | IDA | Gene Ontology | nuclear envelope | 4 |
| GO:0031080 | IBA | Gene Ontology | nuclear pore outer ring | 1 |
| GO:0005643 | IEA | GOA Database | nuclear pore |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR011502 | Nucleoporin Nup85-like |
| Mapman id | Description |
|---|---|
| 23.5.1.1.1.5 | Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.scaffold nucleoporin (NUP75/85) |