Gene: Solyc08g062910.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g062910.4
  • Transcript Identifier Solyc08g062910.4.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 50424406-50427208 : negative

Gene Family Information

  • ID HOM05D000835
  • #Genes/#Species 712/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g062910.4.1
  • uniprot A0A3Q7IJ97
  • gene_id Solyc08g062910

Descriptions

  • Description Elongation factor (AHRD V3.3 *** Q7XTK1_ORYSJ)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009631
ISO
PLAZA Integrative Orthologycold acclimation AT1G56070
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G56070
GO:0006414
IBA
GOA Databasetranslational elongation
GO:0006412
IEA
GOA Databasetranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G56070
GO:0003924
IBA
IEA
GOA DatabaseGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0043022
IBA
GOA Databaseribosome binding
GO:0003746
IBA
GOA Databasetranslation elongation factor activity
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1990904
IBA
GOA Databaseribonucleoprotein complex
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G56070
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT1G56070
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G56070
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G56070
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G56070
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G56070

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000795 Translational (tr)-type GTP-binding domain
IPR041095 Elongation Factor G, domain II
IPR020568 Ribosomal protein S5 domain 2-type fold
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
IPR000640 Elongation factor EFG, domain V-like
IPR005225 Small GTP-binding protein domain
IPR005517 Translation elongation factor EFG/EF2, domain IV
IPR035647 EF-G domain III/V-like
IPR004161 Translation elongation factor EFTu-like, domain 2
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR009000 Translation protein, beta-barrel domain superfamily
Mapman id Description
17.5.2.1 Protein biosynthesis.translation elongation.eEF2 mRNA-translocation factor activity.mRNA-translocation factor (eEF2)