Gene: Solyc08g007360.3

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc08g007360.3
Transcript Identifier Solyc08g007360.3.1
Gene Type Coding gene
Location SL4.0ch08 : 1927033-1935579 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001088
#Genes/#Species 563/99
Phylogenetic origin

ID ORTHO05D002099
#Genes/#Species 317/98
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Solyc08g007360.3.1
uniprot A0A3Q7HKB9
gene_id Solyc08g007360

Descriptions

Short descriptions
Ortholog descriptions

Description Protein transport protein sec16 (AHRD V3.3 *** A0A2G3AP26_CAPAN)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006914	IEA	GOA Database	autophagy
GO:0006914	IEA	InterPro	autophagy
GO:0048208	IBA IEA	GOA Database	COPII vesicle coating
GO:0048208	IEA	InterPro	COPII vesicle coating
GO:0015031	IEA	GOA Database	protein transport
GO:0016192	IEA	GOA Database	vesicle-mediated transport
GO:0007030	IBA	GOA Database	Golgi organization
GO:0070973	IBA	GOA Database	protein localization to endoplasmic reticulum exit site

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT5G47480

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000139	IEA	GOA Database	Golgi membrane
GO:0005794	IEA	GOA Database	Golgi apparatus
GO:0016020	IEA	GOA Database	membrane
GO:0005783	IEA	GOA Database	endoplasmic reticulum
GO:0070971	IBA	GOA Database	endoplasmic reticulum exit site
GO:0012507	IBA	GOA Database	ER to Golgi transport vesicle membrane

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR024340	Sec16, central conserved domain
IPR024298	Ancestral coatomer element 1, Sec16/Sec31
IPR024880	COPII coat assembly protein, Sec16

Mapman id	Description
22.1.1.2.3	Vesicle trafficking.ER export trafficking.Coat protein II (COPII) coatomer machinery.coat protein recruiting.Sar1-GTPase-regulating protein (Sec16)