Gene: Solyc08g005970.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g005970.3
  • Transcript Identifier Solyc08g005970.3.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 744496-763096 : negative

Gene Family Information

  • ID HOM05D003985
  • #Genes/#Species 175/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g005970.3.1
  • uniprot A0A3Q7HJF8
  • gene_id Solyc08g005970

Descriptions

  • Description Protein arginine N-methyltransferase (AHRD V3.3 *** A0A1U8FFB2_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0018216
IEA
GOA Databasepeptidyl-arginine methylation
GO:0018216
IEA
InterPropeptidyl-arginine methylation
GO:0043985
ISO
PLAZA Integrative Orthologyhistone H4-R3 methylation AT4G31120
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT4G31120
GO:0010220
ISO
PLAZA Integrative Orthologypositive regulation of vernalization response AT4G31120
GO:0006355
IBA
GOA Databaseregulation of transcription, DNA-templated
GO:0034969
IBA
GOA Databasehistone arginine methylation
GO:0006479
IEA
GOA Databaseprotein methylation
GO:0006479
IEA
InterProprotein methylation
GO:0035246
IEA
GOA Databasepeptidyl-arginine N-methylation
GO:0035246
IEA
InterPropeptidyl-arginine N-methylation
GO:0032259
IEA
GOA Databasemethylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008276
ISO
PLAZA Integrative Orthologyprotein methyltransferase activity AT4G31120
GO:0008469
IBA
GOA Databasehistone-arginine N-methyltransferase activity
GO:0016274
IEA
GOA Databaseprotein-arginine N-methyltransferase activity
GO:0016274
IEA
InterProprotein-arginine N-methyltransferase activity
GO:0008168
IEA
GOA Databasemethyltransferase activity
GO:0008168
IEA
InterPromethyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005829
IBA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035247 PRMT5, TIM barrel domain
IPR035075 PRMT5 arginine-N-methyltransferase
IPR035248 PRMT5, oligomerisation domain
IPR025799 Protein arginine N-methyltransferase
IPR007857 Protein arginine N-methyltransferase PRMT5
IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
Mapman id Description
16.2.5.3.1 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).recruitment to spliceosome.arginine methyltransferase (PRMT5/CAU1)
26.5.1.1 External stimuli response.drought.stomatal closure signalling.histone methylase (CAU1/PRMT5)