Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG10G330 LG-10 + View
Acer truncatum Atru.chr2.3698 chr2 + View
Actinidia chinensis Actinidia35404 Lachesis_group2 + View
Actinidia chinensis Actinidia37151 Lachesis_group9 + View
Arabidopsis lyrata AL1G63980 scaffold_1 - View
Avicennia marina MSTRG.7001 ScioBoG_102840_HRSCAF_103099 + View
Amaranthus hybridus Ah.06g181550 AmaHy_arrow1_Scaffold_6 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.CI62AJ K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) arahy.Tifrunner.gnm1.Arahy.07 - View
Arabidopsis thaliana AT1G55860 LOW protein: E3 ubiquitin ligase-like protein encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. ubiquitin-protein ligase 1 (UPL1)%3B FUNCTIONS IN: ubiquitin-protein ligase activity%3B INVOLVED IN: protein ubiquitination%2C ubiquitin-dependent protein catabolic process%3B LOCATED IN: cytosol%2C mitochondrion%2C ubiquitin ligase complex%2C membrane%3B EXPRESSED IN: guard cell%2C cultured cell%2C trichome%2C leaf%3B CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B%2C N-terminal (InterPro:IPR000449)%2C Ubiquitin-associated/translation elongation factor EF1B%2C N-terminal%2C eukaryote (InterPro:IPR015940)%2C E3 ubiquitin ligase%2C domain of unknown function DUF913 (InterPro:IPR010314)%2C HECT (InterPro:IPR000569)%2C Ubiquitin interacting motif (InterPro:IPR003903)%2C E3 ubiquitin ligase%2C domain of unknown function DUF908 (InterPro:IPR010309)%2C Armadillo-type fold (InterPro:IPR016024)%2C UBA-like (InterPro:IPR009060)%3B BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 2 (TAIR:AT1G70320.1)%3B Has 8980 Blast hits to 7230 proteins in 418 species: Archae - 33%3B Bacteria - 397%3B Metazoa - 4053%3B Fungi - 1646%3B Plants - 643%3B Viruses - 68%3B Other Eukaryotes - 2140 (source: NCBI BLink). Chr1 - View
Beta vulgaris EL10Ac4g07551 PTHR11254:SF291 - E3 UBIQUITIN-PROTEIN LIGASE HUWE1 Chr4_EL10_PGA_scaffold1 + View
Camellia sinensis var. sinensis CSS0037654 PREDICTED: E3 ubiquitin-protein ligase UPL1 isoform X1 [Vitis vinifera] Chr5 - View
Camellia sinensis var. sinensis CSS0022525 PREDICTED: E3 ubiquitin-protein ligase UPL1 isoform X1 [Vitis vinifera] Chr7 - View
Capsicum annuum CAN.G623.17 PGAv.1.6.scaffold623 + View
Cannabis sativa CANSAT11G0765 NC_044377.1 - View
Corylus avellana Haze_09836 Similar to UPL1: E3 ubiquitin-protein ligase UPL1 (Arabidopsis thaliana OX%3D3702) 4 + View
Coffea canephora Cc05_g15020 E3 ubiquitin-protein ligase UPL1 chr5 + View
Citrus clementina Ciclev10007219m.g scaffold_1 + View
Carpinus fangiana Cfa016908 Cfa07 + View
Cardamine hirsuta CARHR045560 Ubiquitin-protein ligase 1 Chr1 - View
Carya illinoinensis CiPaw.11G204500 K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) Chr11 + View
Carya illinoinensis CiPaw.12G138800 PF00627//PF06012//PF06025//PF14377 - UBA/TS-N domain (UBA) // Domain of Unknown Function (DUF908) (DUF908) // Domain of Unknown Function (DUF913) (DUF913) // Domain of unknown function (DUF4414) (DUF4414) Chr12 + View
Citrullus lanatus ClCG10G004420 ubiquitin-protein ligase 2 LENGTH=3658 CG_Chr10 - View
Cucumis melo MELO3C014115.2 E3 ubiquitin-protein ligase UPL1 chr06 - View
Corchorus olitorius COL.COLO4_09844 hypothetical protein AWUE01014274.1 + View
Chenopodium quinoa AUR62017118 UPL1: E3 ubiquitin-protein ligase UPL1 C_Quinoa_Scaffold_3787 - View
Capsella rubella Carub.0001s4443 PTHR11254:SF291 - E3 UBIQUITIN-PROTEIN LIGASE HUWE1 scaffold_1 - View
Cucumis sativus L. CsaV3_3G004200 E3 ubiquitin-protein ligase upl1 chr3 - View
Daucus carota DCAR_017075 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv40863 GWHABJS00000013 - View
Davidia involucrata Dinv10343 GWHABJS00000001 + View
Durio zibethinus Duzib268G0898 NW_019168270.1 - View
Durio zibethinus Duzib213G0084 NW_019167993.1 - View
Erigeron canadensis ECA236G3808 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA240G4674 Conyza_canadensis_scaffold:5 + View
Eucalyptus grandis Eucgr.F02042 Chr06 - View
Erythranthe guttata Migut.M01647 scaffold_13 - View
Eutrema salsugineum Thhalv10011171m.g K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) scaffold_7 + View
Fragaria x ananassa FAN21G2236 K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) Fvb3-2 - View
Fragaria x ananassa FAN16G1947 PTHR11254//PTHR11254:SF291 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // E3 UBIQUITIN-PROTEIN LIGASE HUWE1 Fvb3-3 - View
Fragaria x ananassa FAN25G0789 K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) Fvb3-1 + View
Fragaria vesca FvH4_3g42950 PTHR11254:SF291 - E3 UBIQUITIN-PROTEIN LIGASE HUWE1 Fvb3 - View
Gossypium hirsutum Gohir.A01G092100 PTHR11254:SF291 - E3 UBIQUITIN-PROTEIN LIGASE HUWE1 A01 + View
Gossypium hirsutum Gohir.D01G062300 PTHR11254:SF291 - E3 UBIQUITIN-PROTEIN LIGASE HUWE1 D01 + View
Gossypium raimondii Gorai.002G100900 Chr02 + View
Lonicera japonica Lj1C891T9 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_9_88720 Lsat_1_v8_lg_9 - View
Malus domestica MD03G1027100 ubiquitin-protein ligase 1 Chr03 + View
Malus domestica MD11G1031000 ubiquitin-protein ligase 1 Chr11 + View
Manihot esculenta Manes.15G059000 Chromosome15 - View
Nelumbo nucifera Nn1g07530 chr1 + View
Nelumbo nucifera Nn1g03156 chr1 - View
Nicotiana tabacum Nitab4.5_0004583g0110 HECT, UBA-like, Armadillo-type fold, Armadillo-like helical, Ubiquitin interacting motif, Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote, E3 ubiquitin ligase, domain of unknown function DUF908, Ubiquitin-associated domain/translation elongation factor EF-Ts, N-terminal, E3 ubiquitin ligase, domain of unknown function DUF913, Domain of unknown function DUF4414 Nitab4.5_0004583 - View
Olea europaea Oeu005956.1 scaffold1216 - View
Olea europaea Oeu005482.1 chr10 + View
Petunia axillaris Peaxi162Scf00139g00125 ubiquitin-protein ligase 2 Peaxi162Scf00139 - View
Punica granatum PGR083G1157 NC_045133.1 - View
Prunus persica Prupe.6G024400 Pp06 + View
Papaver somniferum PSO675G3434 NC_039358.1 - View
Papaver somniferum PSO541G0267 NC_039363.1 + View
Populus trichocarpa Potri.001G368600 K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) Chr01 + View
Quercus lobata QL08p003927 8 - View
Rhododendron simsii Rhsim04G0012200 chr04 - View
Striga asiatica SGA_v2.0_scaffold171G38855 scaffold171 - View
Striga asiatica SGA_v2.0_scaffold168G38567 scaffold168 + View
Salvia bowleyana SalBow8G4314 GWHASIU00000004 - View
Salix brachista Sabra16G0241700 GWHAAZH00000016 + View
Simmondsia chinensis Sc03g0011480 GWHAASQ00000003 + View
Sechium edule Sed0017501 LG03 + View
Sapria himalayana SHI26483 scaffold60_3140063 - View
Solanum pennellii Sopen07g033840 encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | ubiquitin-protein ligase 1 (UPL1) | CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal , Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote , E3 ubiquitin ligase, domain of unknown function DUF913 , Ubiquitin interacting motif , E3 ubiquitin ligase, domain of unknown function DUF908 , HECT , Armadillo-type fold , UBA-like | BEST Arabidopsis thaliana protein match is: ubiquitin-protein ligase 2 ., E3 ubiquitin ligase, domain of unknown function DUF913 Spenn-ch07 + View
Solanum tuberosum PGSC0003DMG402022274 E3 ubiquitin-protein ligase UPL1 ST4.03ch07 + View
Selenicereus undatus Hund23101 Scaffold_33680 + View
Trochodendron aralioides TAR624G0765 group9 + View
Trochodendron aralioides TAR626G0075 group3 - View
Theobroma cacao Thecc.07G012100 E3 ubiquitin protein ligase upl2 Chromosome_7 - View
Tarenaya hassleriana THA.LOC104815693 E3 ubiquitin-protein ligase UPL1-like isoform X1 NW_010965696.1 - View
Tarenaya hassleriana THA.LOC104822729 E3 ubiquitin-protein ligase UPL1-like isoform X1 NW_010966725.1 - View
Tripterygium wilfordii TWI38G1048 NC_052252.1 + View
Utricularia gibba unitig_62.g23303 unitig_62 + View
Vaccinium macrocarpon vmacro09645 Similar to UPL1: E3 ubiquitin-protein ligase UPL1 (Arabidopsis thaliana OX%3D3702) chr6_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01014697001 chr19 + View