Gene: Solyc07g041000.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc07g041000.4
  • Transcript Identifier Solyc07g041000.4.1
  • Gene Type Coding gene
  • Location SL4.0ch07 : 51325268-51328342 : negative

Gene Family Information

  • ID HOM05D002154
  • #Genes/#Species 311/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc07g041000.4.1
  • uniprot A0A3Q7I5A8
  • gene_id Solyc07g041000

Descriptions

  • Description Cleavage and polyadenylation specificity factor subunit 5-like protein (AHRD V3.3 *** A0A2K3PRX7_TRIPR)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006378
IEA
GOA DatabasemRNA polyadenylation
GO:0006378
IEA
InterPromRNA polyadenylation
GO:0006397
IBA
IEA
GOA DatabasemRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IBA
IEA
GOA DatabasemRNA binding
GO:0003729
IEA
InterPromRNA binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G29820

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005849
IBA
IEA
GOA DatabasemRNA cleavage factor complex
GO:0005849
IEA
InterPromRNA cleavage factor complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015797 NUDIX hydrolase-like domain superfamily
IPR016706 Cleavage/polyadenylation specificity factor subunit 5
Mapman id Description
16.3.1.4.1 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage Factor I (CF-Im) complex.component CPFS5/CFIm25