Gene: AT4G29820

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G29820
  • Transcript Identifier AT4G29820.1
  • Gene Type Coding gene
  • Location Chr4 : 14596047-14597317 : negative

Gene Family Information

  • ID HOM05D002154
  • #Genes/#Species 311/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G29820.1
  • symbol CFIM-25
  • Alias ATCFIM-25,ARABIDOPSIS THALIANA HOMOLOG OF CFIM-25
  • uniprot Q94AF0

Descriptions

  • Description homolog of CFIM-25
  • Computational description homolog of CFIM-25 (CFIM-25); CONTAINS InterPro DOMAIN/s: Cleavage/polyadenylation specificity factor, 25kDa subunit (InterPro:IPR016706); BEST Arabidopsis thaliana protein match is: Cleavage/polyadenylation specificity factor, 25kDa subunit (TAIR:AT4G25550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006378
IEA
Gene OntologymRNA polyadenylation
GO:0006378
IEA
InterPromRNA polyadenylation
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0006397
IBA
Gene OntologymRNA processing1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding2
GO:0003729
IEA
GOA DatabasemRNA binding
GO:0003729
IBA
Gene OntologymRNA binding1
GO:0003729
IEA
InterPromRNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003723
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005849
IEA
GOA DatabasemRNA cleavage factor complex
GO:0005849
IBA
Gene OntologymRNA cleavage factor complex1
GO:0005849
IEA
InterPromRNA cleavage factor complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016706 Cleavage/polyadenylation specificity factor subunit 5
IPR015797 NUDIX hydrolase-like domain superfamily
Mapman id Description
16.3.1.4.1 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage Factor I (CF-Im) complex.component CPFS5/CFIm25