Gene: Solyc06g084210.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g084210.3
- Transcript Identifier Solyc06g084210.3.1
- Gene Type Coding gene
- Location SL4.0ch06 : 46968083-46982374 : positive
Gene Family Information
- ID HOM05D001545
- #Genes/#Species 413/99
- Phylogenetic origin
- ID ORTHO05D001600
- #Genes/#Species 383/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc06g084210.3.1
- uniprot A0A3Q7H255
- gene_id Solyc06g084210
Descriptions
- Description Sec24-like transport protein (AHRD V3.3 *** A0A2U1NGT5_ARTAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | GOA Database | intracellular protein transport | |
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0006888 | IEA | GOA Database | endoplasmic reticulum to Golgi vesicle-mediated transport | |
| GO:0006888 | IEA | InterPro | endoplasmic reticulum to Golgi vesicle-mediated transport | |
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0090110 | IBA | GOA Database | COPII-coated vesicle cargo loading | |
| GO:0006979 | ISO | PLAZA Integrative Orthology | response to oxidative stress | AT3G44340 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008270 | IBA IEA | GOA Database | zinc ion binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0000149 | IBA | GOA Database | SNARE binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030127 | IBA IEA | GOA Database | COPII vesicle coat | |
| GO:0030127 | IEA | InterPro | COPII vesicle coat | |
| GO:0070971 | IBA | GOA Database | endoplasmic reticulum exit site | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G44340 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036465 | von Willebrand factor A-like domain superfamily |
| IPR029006 | ADF-H/Gelsolin-like domain superfamily |
| IPR012990 | Sec23/Sec24 beta-sandwich |
| IPR006896 | Sec23/Sec24, trunk domain |
| IPR036180 | Gelsolin-like domain superfamily |
| IPR041742 | Sec24-like, trunk domain |
| IPR006895 | Zinc finger, Sec23/Sec24-type |
| IPR036174 | Zinc finger, Sec23/Sec24-type superfamily |
| IPR007123 | Gelsolin-like domain |
| IPR036175 | Sec23/Sec24 helical domain superfamily |
| IPR006900 | Sec23/Sec24, helical domain |
| Mapman id | Description |
|---|---|
| 22.1.1.1.3.2 | Vesicle trafficking.ER export trafficking.Coat protein II (COPII) coatomer machinery.coat protein complex.Sec23/24 cargo adaptor subcomplex.component Sec24 |