Gene: Solyc06g074870.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g074870.3
- Transcript Identifier Solyc06g074870.3.1
- Gene Type Coding gene
- Location SL4.0ch06 : 44056221-44058771 : positive
Gene Family Information
- ID HOM05D004863
- #Genes/#Species 152/92
- Phylogenetic origin
- ID ORTHO05D005802
- #Genes/#Species 152/88
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc06g074870.3.1
- uniprot A0A3Q7H040
- gene_id Solyc06g074870
Descriptions
- Description sister chromatid cohesion 1 protein 1 (AHRD V3.3 *** A0A2I4EQY0_9ROSI)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0051754 | ISO | PLAZA Integrative Orthology | meiotic sister chromatid cohesion, centromeric | AT5G05490 |
| GO:0051276 | ISO | PLAZA Integrative Orthology | chromosome organization | AT5G05490 |
| GO:0010032 | ISO | PLAZA Integrative Orthology | meiotic chromosome condensation | AT5G05490 |
| GO:0051455 | ISO | PLAZA Integrative Orthology | monopolar spindle attachment to meiosis I kinetochore | AT5G05490 |
| GO:0007062 | IEA | InterPro | sister chromatid cohesion | |
| GO:0051083 | IBA | GOA Database | 'de novo' cotranslational protein folding | |
| GO:0061077 | IBA | GOA Database | chaperone-mediated protein folding | |
| GO:0043335 | IBA | GOA Database | protein unfolding | |
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0006457 | IEA | GOA Database | protein folding | |
| GO:0000413 | IEA | GOA Database | protein peptidyl-prolyl isomerization |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0044183 | IBA | GOA Database | protein folding chaperone | |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D004863 |
| GO:0043022 | IBA | GOA Database | ribosome binding | |
| GO:0003755 | IBA | GOA Database | peptidyl-prolyl cis-trans isomerase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005694 | ISO | PLAZA Integrative Orthology | chromosome | AT5G05490 |
| GO:0008278 | IEA | InterPro | cohesin complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR039781 | Rad21/Rec8-like protein |
| Mapman id | Description |
|---|---|
| 13.3.4.1.4 | Cell cycle organisation.mitosis and meiosis.sister chromatid separation.cohesin regulator complex.meiotic-specific Kleisin-type component SYN1 |