Gene: Solyc06g009530.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g009530.3
  • Transcript Identifier Solyc06g009530.3.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 3507478-3534597 : negative

Gene Family Information

  • ID HOM05D005254
  • #Genes/#Species 144/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g009530.3.1
  • uniprot A0A3Q7GSY1
  • gene_id Solyc06g009530

Descriptions

  • Description Carbohydrate-binding-like fold (AHRD V3.3 *** A0A061DSB9_THECC)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G62360
GO:0030246
ISO
PLAZA Homology (enrichment)carbohydrate binding HOM05D005254

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005789
IBA
GOA Databaseendoplasmic reticulum membrane
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT3G62360
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT3G62360
GO:0009505
ISO
PLAZA Integrative Orthologyplant-type cell wall AT3G62360
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT3G62360

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008969 Carboxypeptidase-like, regulatory domain superfamily
Mapman id Description
35.1 not assigned.annotated