Gene: AT3G62360
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G62360
- Transcript Identifier AT3G62360.2
- Gene Type Coding gene
- Location Chr3 : 23073020-23080455 : negative
Gene Family Information
- ID HOM05D005254
- #Genes/#Species 144/95
- Phylogenetic origin
- ID ORTHO05D007557
- #Genes/#Species 129/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G62360.2
- uniprot Q9LZQ4
Descriptions
- Description Carbohydrate-binding-like fold
- Computational description Carbohydrate-binding-like fold; FUNCTIONS IN: carbohydrate binding; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate-binding-like fold (InterPro:IPR013784); Has 321 Blast hits to 256 proteins in 98 species: Archae - 6; Bacteria - 117; Metazoa - 138; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003729 | IDA | Gene Ontology | mRNA binding | 1 |
GO:0030246 | ISO | PLAZA Homology (enrichment) | carbohydrate binding | HOM05D005254 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005576 | ISM | Gene Ontology | extracellular region | |
GO:0009505 | IDA | GOA Database | plant-type cell wall | |
GO:0009505 | HDA | Gene Ontology | plant-type cell wall | 2 |
GO:0005783 | IDA | GOA Database | endoplasmic reticulum | |
GO:0005783 | HDA | Gene Ontology | endoplasmic reticulum | 3 |
GO:0000325 | HDA | Gene Ontology | plant-type vacuole | 4 |
GO:0005794 | IDA | GOA Database | Golgi apparatus | |
GO:0005794 | HDA | Gene Ontology | Golgi apparatus | 5 |
GO:0005829 | HDA | Gene Ontology | cytosol | 6 |
GO:0005789 | IBA | Gene Ontology | endoplasmic reticulum membrane | 7 |
GO:0005774 | IDA | GOA Database | vacuolar membrane | |
GO:0016021 | IEA | GOA Database | integral component of membrane | |
GO:0016020 | IEA | GOA Database | membrane |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |