Gene: AT3G62360

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G62360
  • Transcript Identifier AT3G62360.2
  • Gene Type Coding gene
  • Location Chr3 : 23073020-23080455 : negative

Gene Family Information

  • ID HOM05D005254
  • #Genes/#Species 144/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G62360.2
  • uniprot Q9LZQ4

Descriptions

  • Description Carbohydrate-binding-like fold
  • Computational description Carbohydrate-binding-like fold; FUNCTIONS IN: carbohydrate binding; LOCATED IN: endoplasmic reticulum, plasma membrane, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carbohydrate-binding-like fold (InterPro:IPR013784); Has 321 Blast hits to 256 proteins in 98 species: Archae - 6; Bacteria - 117; Metazoa - 138; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IDA
Gene OntologymRNA binding1
GO:0030246
ISO
PLAZA Homology (enrichment)carbohydrate binding HOM05D005254

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005576
ISM
Gene Ontologyextracellular region
GO:0009505
IDA
GOA Databaseplant-type cell wall
GO:0009505
HDA
Gene Ontologyplant-type cell wall2
GO:0005783
IDA
GOA Databaseendoplasmic reticulum
GO:0005783
HDA
Gene Ontologyendoplasmic reticulum3
GO:0000325
HDA
Gene Ontologyplant-type vacuole4
GO:0005794
IDA
GOA DatabaseGolgi apparatus
GO:0005794
HDA
Gene OntologyGolgi apparatus5
GO:0005829
HDA
Gene Ontologycytosol6
GO:0005789
IBA
Gene Ontologyendoplasmic reticulum membrane7
GO:0005774
IDA
GOA Databasevacuolar membrane
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013783 Immunoglobulin-like fold
IPR008969 Carboxypeptidase-like, regulatory domain superfamily
Mapman id Description
35.1 not assigned.annotated