Gene: Solyc06g005670.4

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc06g005670.4
Transcript Identifier Solyc06g005670.4.1
Gene Type Coding gene
Location SL4.0ch06 : 753883-758355 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000810
#Genes/#Species 729/97
Phylogenetic origin

ID ORTHO05D001064
#Genes/#Species 503/97
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

tid Solyc06g005670.4.1
uniprot A0A3Q7GNV5
gene_id Solyc06g005670

Descriptions

Short descriptions
Ortholog descriptions

Description Pumilio-like protein 1 (AHRD V3.3 *** A0A2G2Z7W6_CAPAN)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006417	IEA	GOA Database	regulation of translation
GO:0010608	IBA	GOA Database	posttranscriptional regulation of gene expression

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003723	IEA	GOA Database	RNA binding
GO:0003723	IEA	InterPro	RNA binding
GO:0003729	IBA	GOA Database	mRNA binding
GO:0003730	ISO	PLAZA Integrative Orthology	mRNA 3'-UTR binding	AT2G29190

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005737	IBA	GOA Database	cytoplasm
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT2G29190
GO:0005886	ISO	PLAZA Integrative Orthology	plasma membrane	AT2G29140

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001313	Pumilio RNA-binding repeat
IPR033712	Pumilio, RNA binding domain
IPR012940	Nucleic acid binding NABP
IPR011989	Armadillo-like helical
IPR016024	Armadillo-type fold

Mapman id	Description
35.1	not assigned.annotated