Gene: AT2G29140
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT2G29140
- Transcript Identifier AT2G29140.1
- Gene Type Coding gene
- Location Chr2 : 12531392-12535060 : positive
Gene Family Information
- ID HOM05D000810
- #Genes/#Species 729/97
- Phylogenetic origin
- ID ORTHO05D001064
- #Genes/#Species 503/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT2G29140.1
- symbol PUM3
- Alias APUM3,pumilio 3
- uniprot Q9ZW02
Descriptions
- Description pumilio 3
- Computational description pumilio 3 (PUM3); FUNCTIONS IN: RNA binding, binding; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP (InterPro:IPR012940), Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 1 (TAIR:AT2G29200.1); Has 3920 Blast hits to 2027 proteins in 241 species: Archae - 0; Bacteria - 8; Metazoa - 815; Fungi - 1344; Plants - 871; Viruses - 0; Other Eukaryotes - 882 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010608 | IBA | Gene Ontology | posttranscriptional regulation of gene expression | 1 |
| GO:0006417 | IEA | GOA Database | regulation of translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | IDA, HDA IBA | Gene Ontology | mRNA binding | 1 2 3 |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0005737 | ISM, IBA | Gene Ontology | cytoplasm | 1 |
| GO:0005886 | IDA | GOA Database | plasma membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |