Gene: AT2G29190

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G29190
  • Transcript Identifier AT2G29190.2
  • Gene Type Coding gene
  • Location Chr2 : 12544260-12548071 : negative

Gene Family Information

  • ID HOM05D000810
  • #Genes/#Species 729/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G29190.2
  • symbol PUM2
  • Alias APUM2,pumilio 2
  • uniprot Q9ZW06

Descriptions

  • Description pumilio 2
  • Computational description pumilio 2 (PUM2); FUNCTIONS IN: mRNA binding, RNA binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP (InterPro:IPR012940), Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 1 (TAIR:AT2G29200.1); Has 3838 Blast hits to 2002 proteins in 239 species: Archae - 0; Bacteria - 4; Metazoa - 765; Fungi - 1352; Plants - 848; Viruses - 0; Other Eukaryotes - 869 (source: NCBI BLink).
  • Computational description pumilio 2 (PUM2); CONTAINS InterPro DOMAIN/s: Nucleic acid binding NABP (InterPro:IPR012940), Pumilio RNA-binding repeat (InterPro:IPR001313), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: pumilio 1 (TAIR:AT2G29200.1).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010608
IBA
Gene Ontologyposttranscriptional regulation of gene expression1
GO:0006417
IEA
GOA Databaseregulation of translation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IDA, IPI, HDA
IBA
Gene OntologymRNA binding1 2 3 4
GO:0003730
IDA
Gene OntologymRNA 3'-UTR binding2
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IDA
Gene OntologyRNA binding5
GO:0003723
IEA
InterProRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM, IBA
Gene Ontologycytoplasm1
GO:0005829
IDA
GOA Databasecytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033712 Pumilio, RNA binding domain
IPR012940 Nucleic acid binding NABP
IPR001313 Pumilio RNA-binding repeat
IPR016024 Armadillo-type fold
IPR011989 Armadillo-like helical
Mapman id Description
35.1 not assigned.annotated