Gene: Solyc05g054500.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g054500.1
  • Transcript Identifier Solyc05g054500.1.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 63799036-63800235 : negative

Gene Family Information

  • ID HOM05D003624
  • #Genes/#Species 189/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g054500.1.1
  • gene_id Solyc05g054500

Descriptions

  • Description DNA/RNA-binding protein Kin17 (AHRD V3.3 *** A0A200R6H7_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035874
ISO
PLAZA Integrative Orthologycellular response to copper ion starvation AT1G55460
GO:0048638
ISO
PLAZA Integrative Orthologyregulation of developmental growth AT1G55460

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G55460

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G51795
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G51795
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT1G55460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036236 Zinc finger C2H2 superfamily
IPR041330 KN17, SH3-like C-terminal domain
IPR019447 DNA/RNA-binding protein Kin17, WH-like domain
IPR014722 Ribosomal protein L2, domain 2
IPR041995 Kin17, KOW domain
IPR038254 DNA/RNA-binding protein KIN17, WH-like domain superfamily
IPR037321 KIN17-like protein
Mapman id Description
25.4.3.1.2 Nutrient uptake.metal homeostasis.copper.regulation.copper homeostasis co-regulator (KIN17)