Gene: AT5G51795

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G51795
  • Transcript Identifier AT5G51795.1
  • Gene Type Coding gene
  • Location Chr5 : 21043083-21044194 : negative

Gene Family Information

  • ID HOM05D003624
  • #Genes/#Species 189/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G51795.1
  • uniprot F4KDD7

Descriptions

  • Description DNA/RNA-binding protein Kin17, conserved region
  • Computational description DNA/RNA-binding protein Kin17, conserved region; CONTAINS InterPro DOMAIN/s: DNA/RNA-binding protein Kin17, conserved region (InterPro:IPR019447); BEST Arabidopsis thaliana protein match is: DNA/RNA-binding protein Kin17, conserved region (TAIR:AT1G55460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006260
IBA
Gene OntologyDNA replication1
GO:0006974
IBA
Gene Ontologycellular response to DNA damage stimulus1
GO:0035874
ISO
PLAZA Integrative Orthologycellular response to copper ion starvation AT1G55460
GO:0048638
ISO
PLAZA Integrative Orthologyregulation of developmental growth AT1G55460

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003690
IBA
Gene Ontologydouble-stranded DNA binding1
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G55460

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
IBA
Gene Ontologynucleus1 2
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IDA
Gene Ontologycytoplasm2
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT1G55460

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041330 KN17, SH3-like C-terminal domain
IPR038254 DNA/RNA-binding protein KIN17, WH-like domain superfamily
IPR014722 Ribosomal protein L2, domain 2
IPR019447 DNA/RNA-binding protein Kin17, WH-like domain
IPR041995 Kin17, KOW domain
IPR037321 KIN17-like protein
Mapman id Description
25.4.3.1.2 Nutrient uptake.metal homeostasis.copper.regulation.copper homeostasis co-regulator (KIN17)