Gene: Solyc05g048810.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g048810.4
  • Transcript Identifier Solyc05g048810.4.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 58858372-58864478 : negative

Gene Family Information

  • ID HOM05D005745
  • #Genes/#Species 135/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g048810.4.1
  • uniprot A0A3Q7GHW9
  • gene_id Solyc05g048810

Descriptions

  • Description tRNA-specific adenosine deaminase 1-like protein (AHRD V3.3 *** A0A2K3PA98_TRIPR)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IBA
IEA
GOA DatabaseRNA processing
GO:0006396
IEA
InterProRNA processing
GO:0006382
IBA
GOA Databaseadenosine to inosine editing
GO:0006400
ISO
PLAZA Integrative OrthologytRNA modification AT1G01760

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0004000
IEA
GOA Databaseadenosine deaminase activity
GO:0004000
IEA
InterProadenosine deaminase activity
GO:0003726
IBA
GOA Databasedouble-stranded RNA adenosine deaminase activity
GO:0003725
IBA
GOA Databasedouble-stranded RNA binding
GO:0008251
IBA
GOA DatabasetRNA-specific adenosine deaminase activity
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT1G01760

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IBA
GOA Databasenucleolus
GO:0005737
IBA
GOA Databasecytoplasm
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G01760

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002466 Adenosine deaminase/editase
Mapman id Description
16.5.1.1 RNA processing.RNA modification.adenosine deamination.tRNA adenosine deaminase (TAD1)