Gene: Solyc05g015750.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc05g015750.3
- Transcript Identifier Solyc05g015750.3.1
- Gene Type Coding gene
- Location SL4.0ch05 : 11941846-11947955 : negative
Gene Family Information
- ID HOM05D000042
- #Genes/#Species 4894/100
- Phylogenetic origin
- ID ORTHO05D000028
- #Genes/#Species 3637/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc05g015750.3.1
- uniprot Q7Y039
- gene_id Solyc05g015750
Descriptions
- Description SEPALLATA3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048481 | ISO | PLAZA Integrative Orthology | plant ovule development | AT1G24260 |
| GO:0001708 | ISO | PLAZA Integrative Orthology | cell fate specification | AT1G24260 |
| GO:0010214 | ISO | PLAZA Integrative Orthology | seed coat development | AT1G24260 |
| GO:0048833 | ISO | PLAZA Integrative Orthology | specification of floral organ number | AT1G24260 |
| GO:0080001 | ISO | PLAZA Integrative Orthology | mucilage extrusion from seed coat | AT1G24260 |
| GO:0009908 | ISO | PLAZA Integrative Orthology | flower development | AT1G24260 |
| GO:0010093 | ISO | PLAZA Integrative Orthology | specification of floral organ identity | AT1G24260 |
| GO:0006357 | IBA | GOA Database | regulation of transcription by RNA polymerase II | |
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0045944 | IEA | GOA Database | positive regulation of transcription by RNA polymerase II | |
| GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | IDA | Gene Ontology | DNA-binding transcription factor activity | 1 |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G24260 |
| GO:0000978 | IBA | GOA Database | RNA polymerase II cis-regulatory region sequence-specific DNA binding | |
| GO:0000981 | IBA | GOA Database | DNA-binding transcription factor activity, RNA polymerase II-specific | |
| GO:0000977 | IEA | GOA Database | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0000977 | IEA | InterPro | RNA polymerase II transcription regulatory region sequence-specific DNA binding | |
| GO:0046983 | IEA | GOA Database | protein dimerization activity | |
| GO:0046983 | IEA | InterPro | protein dimerization activity | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005634 | IDA | Gene Ontology | nucleus | 1 |
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.14 | RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL) |