Gene: Solyc05g005800.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc05g005800.4
  • Transcript Identifier Solyc05g005800.4.1
  • Gene Type Coding gene
  • Location SL4.0ch05 : 659485-669884 : positive

Gene Family Information

  • ID HOM05D001529
  • #Genes/#Species 415/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc05g005800.4.1
  • uniprot A0A3Q7H4V4
  • gene_id Solyc05g005800

Descriptions

  • Description Threonine--tRNA ligase, cytoplasmic (AHRD V3.3 *** A0A2G2VMD7_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006435
IBA
IEA
GOA Databasethreonyl-tRNA aminoacylation
GO:0006435
IEA
InterProthreonyl-tRNA aminoacylation
GO:0006418
IEA
GOA DatabasetRNA aminoacylation for protein translation
GO:0006418
IEA
InterProtRNA aminoacylation for protein translation
GO:0043039
IEA
GOA DatabasetRNA aminoacylation
GO:0043039
IEA
InterProtRNA aminoacylation
GO:0006412
IEA
GOA Databasetranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016874
IEA
GOA Databaseligase activity
GO:0004829
IBA
IEA
GOA Databasethreonine-tRNA ligase activity
GO:0004829
IEA
InterProthreonine-tRNA ligase activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IBA
GOA Databasechloroplast
GO:0005739
IBA
IEA
GOA Databasemitochondrion
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
IPR002320 Threonine-tRNA ligase, class IIa
IPR004154 Anticodon-binding
IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily
IPR012947 Threonyl/alanyl tRNA synthetase, SAD
IPR033728 Threonine-tRNA ligase catalytic core domain
IPR004095 TGS
IPR012675 Beta-grasp domain superfamily
IPR012676 TGS-like
IPR036621 Anticodon-binding domain superfamily
Mapman id Description
17.2.19 Protein biosynthesis.aminoacyl-tRNA synthetase activities.threonine-tRNA ligase