Gene: Solyc04g054170.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g054170.4
  • Transcript Identifier Solyc04g054170.4.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 51162426-51169719 : positive

Gene Family Information

  • ID HOM05D004947
  • #Genes/#Species 150/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g054170.4.1
  • uniprot A0A3Q7GX15
  • gene_id Solyc04g054170

Descriptions

  • Description Protein CPR-5 (AHRD V3.3 *** A0A2I0WW63_9ASPA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048573
ISO
PLAZA Integrative Orthologyphotoperiodism, flowering AT5G64930
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene AT5G64930
GO:0007568
ISO
PLAZA Integrative Orthologyaging AT5G64930
GO:0009868
ISO
PLAZA Integrative Orthologyjasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway AT5G64930
GO:0009626
ISO
PLAZA Integrative Orthologyplant-type hypersensitive response AT5G64930
GO:0010182
ISO
PLAZA Integrative Orthologysugar mediated signaling pathway AT5G64930
GO:0051707
ISO
PLAZA Integrative Orthologyresponse to other organism AT5G64930
GO:0009627
ISO
PLAZA Integrative Orthologysystemic acquired resistance AT5G64930
GO:0006952
IEA
GOA Databasedefense response
GO:0006952
IEA
InterProdefense response
GO:0010150
IEA
GOA Databaseleaf senescence
GO:0010150
IEA
InterProleaf senescence
GO:0010090
IEA
GOA Databasetrichome morphogenesis
GO:0010090
IEA
InterProtrichome morphogenesis

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G64930
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044708 Constitutive expression of pathogenesis-related genes 5
Mapman id Description
23.5.1.1.2.4 Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).inner ring.scaffold nucleoporin (CPR5)
27.2.9.1 Multi-process regulation.Programmed Cell Death (PCD) system.CPR5-CKI signalling pathway.regulatory nucleoporin (CPR5)