Gene: Solyc04g047770.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g047770.3
  • Transcript Identifier Solyc04g047770.3.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 36866379-36870799 : positive

Gene Family Information

  • ID HOM05D003995
  • #Genes/#Species 175/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g047770.3.1
  • uniprot A0A3Q7GV52
  • gene_id Solyc04g047770

Descriptions

  • Description VHS domain-containing protein (AHRD V3.3 *** A0A2G2ZIB2_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035652
ISO
PLAZA Integrative Orthologyclathrin-coated vesicle cargo loading AT3G16270

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035091
IEA
GOA Databasephosphatidylinositol binding
GO:0035091
IEA
InterProphosphatidylinositol binding
GO:0043130
IEA
GOA Databaseubiquitin binding
GO:0043130
IEA
InterProubiquitin binding
GO:0030276
ISO
PLAZA Integrative Orthologyclathrin binding AT3G16270

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030136
IEA
GOA Databaseclathrin-coated vesicle
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0032588
IBA
GOA Databasetrans-Golgi network membrane
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT3G16270
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT3G16270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016024 Armadillo-type fold
IPR013809 ENTH domain
IPR008942 ENTH/VHS
IPR039273 AP-4 complex accessory subunit Tepsin
IPR035802 Tepsin, ENTH/VHS domain
IPR002014 VHS domain
Mapman id Description
22.3.1.8.3 Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.CCV accessory factor activities.regulatory protein (MTV1)