Gene: Solyc03g093480.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc03g093480.3
  • Transcript Identifier Solyc03g093480.3.1
  • Gene Type Coding gene
  • Location SL4.0ch03 : 49334448-49360981 : negative

Gene Family Information

  • ID HOM05D003586
  • #Genes/#Species 191/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc03g093480.3.1
  • uniprot A0A3Q7FLC0
  • gene_id Solyc03g093480

Descriptions

  • Description ARM repeat superfamily protein (AHRD V3.3 *** AT3G06530.5)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0042254
IEA
GOA Databaseribosome biogenesis
GO:0045943
IBA
GOA Databasepositive regulation of transcription by RNA polymerase I
GO:0000462
IBA
GOA Databasematuration of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030515
IBA
GOA DatabasesnoRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G06530

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IEA
GOA Databasenucleolus
GO:0005634
IEA
GOA Databasenucleus
GO:0034455
IBA
GOA Databaset-UTP complex
GO:0032040
IBA
GOA Databasesmall-subunit processome
GO:0030686
IBA
GOA Database90S preribosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016024 Armadillo-type fold
IPR012954 BP28, C-terminal domain
IPR022125 U3 small nucleolar RNA-associated protein 10, N-terminal
IPR040191 U3 small nucleolar RNA-associated protein 10
Mapman id Description
17.1.3.2.1.2.2 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.UtpA module.assembly factor (UTP10)