Gene: Solyc03g083310.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc03g083310.4
  • Transcript Identifier Solyc03g083310.4.1
  • Gene Type Coding gene
  • Location SL4.0ch03 : 47712596-47720190 : negative

Gene Family Information

  • ID HOM05D005383
  • #Genes/#Species 141/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc03g083310.4.1
  • uniprot A0A3Q7GA78
  • gene_id Solyc03g083310

Descriptions

  • Description Zinc finger, C2H2 (AHRD V3.3 *** A0A2U1PHW7_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT4G06634
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT4G06634
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT4G06634
GO:0009788
ISO
PLAZA Integrative Orthologynegative regulation of abscisic acid-activated signaling pathway AT4G06634
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT4G06634
GO:0009646
ISO
PLAZA Integrative Orthologyresponse to absence of light AT4G06634
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT4G06634
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT4G06634
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT4G06634
GO:1901000
ISO
PLAZA Integrative Orthologyregulation of response to salt stress AT4G06634
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT4G06634
GO:1900150
ISO
PLAZA Integrative Orthologyregulation of defense response to fungus AT4G06634
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT4G06634
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G06634
GO:0000978
IBA
GOA DatabaseRNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981
IBA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G06634
GO:0031519
IBA
GOA DatabasePcG protein complex
GO:0005667
IBA
GOA Databasetranscription regulator complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036236 Zinc finger C2H2 superfamily
IPR013087 Zinc finger C2H2-type
Mapman id Description
15.4.4.2 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.component TFC2/YY1