Gene: AT4G06634

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G06634
  • Transcript Identifier AT4G06634.1
  • Gene Type Coding gene
  • Location Chr4 : 3764499-3766439 : negative

Gene Family Information

  • ID HOM05D005383
  • #Genes/#Species 141/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G06634.1
  • symbol YY1
  • Alias AtYY1
  • full_name Yin Yang 1
  • uniprot Q2V3L3

Descriptions

  • Description zinc finger (C2H2 type) family protein
  • Computational description zinc finger (C2H2 type) family protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087), Zinc finger, C2H2-type/integrase, DNA-binding (InterPro:IPR013087); BEST Arabidopsis thaliana protein match is: Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein (TAIR:AT5G04240.1); Has 122259 Blast hits to 40339 proteins in 1149 species: Archae - 4; Bacteria - 49; Metazoa - 113567; Fungi - 3973; Plants - 533; Viruses - 41; Other Eukaryotes - 4092 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045892
IDA
Gene Ontologynegative regulation of transcription, DNA-templated1
GO:0009738
IEA
GOA Databaseabscisic acid-activated signaling pathway
GO:0006952
IEA
GOA Databasedefense response
GO:0006357
IBA
Gene Ontologyregulation of transcription by RNA polymerase II2
GO:1901000
IMP
Gene Ontologyregulation of response to salt stress1
GO:0045893
IDA
Gene Ontologypositive regulation of transcription, DNA-templated1
GO:0009788
IMP
Gene Ontologynegative regulation of abscisic acid-activated signaling pathway1
GO:0009737
IEP
Gene Ontologyresponse to abscisic acid1
GO:0009651
IEP
Gene Ontologyresponse to salt stress1
GO:0009646
IEP
Gene Ontologyresponse to absence of light1
GO:0009416
IEP
Gene Ontologyresponse to light stimulus1
GO:0009414
IEP
Gene Ontologyresponse to water deprivation1
GO:0006970
IEP
Gene Ontologyresponse to osmotic stress1
GO:1900150
IMP
Gene Ontologyregulation of defense response to fungus3
GO:0006355
IMP
Gene Ontologyregulation of transcription, DNA-templated3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0000981
IBA
Gene OntologyDNA-binding transcription factor activity, RNA polymerase II-specific2
GO:0000978
IBA
Gene OntologyRNA polymerase II cis-regulatory region sequence-specific DNA binding2
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0043565
IDA
Gene Ontologysequence-specific DNA binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus3
GO:0005667
IBA
Gene Ontologytranscription regulator complex2
GO:0031519
IBA
Gene OntologyPcG protein complex2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036236 Zinc finger C2H2 superfamily
IPR013087 Zinc finger C2H2-type
Mapman id Description
15.4.4.2 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.component TFC2/YY1