Gene: Solyc02g094260.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g094260.1
  • Transcript Identifier Solyc02g094260.1.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 52938081-52939295 : positive

Gene Family Information

  • ID HOM05D006533
  • #Genes/#Species 122/86
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g094260.1.1
  • uniprot A0A3Q7FE87
  • gene_id Solyc02g094260

Descriptions

  • Description Protein SMG9-like (AHRD V3.3 *** A0A2K3P1Q2_TRIPR)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000184
IBA
IEA
GOA Databasenuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000184
IEA
InterPronuclear-transcribed mRNA catabolic process, nonsense-mediated decay

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR039177 Protein SMG9
Mapman id Description
17.3.2.2.3 Protein biosynthesis.mRNA quality control.NMD Nonsense-Mediated Decay.SMG1C protein kinase complex.component SMG9