Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc02g094260.1 Solanum lycopersicum HOM05D006533 ORTHO05D008625 9.6e-231 803.1 405 100.0
Sopen02g038900 Solanum pennellii HOM05D006533 ORTHO05D008625 2.9e-227 791.6 405 98.3
PGSC0003DMG400020249 Solanum tuberosum HOM05D006533 ORTHO05D008625 2.3e-224 781.9 404 97.8
CAN.G473.117 Capsicum annuum HOM05D006533 ORTHO05D008625 8.5e-187 657.1 359 92.8
Nitab4.5_0001510g0030 Nicotiana tabacum HOM05D006533 ORTHO05D008625 8.8e-184 647.1 432 78.7
Peaxi162Scf00133g00721 Petunia axillaris HOM05D006533 ORTHO05D008625 5.0e-171 604.7 399 78.2
Nitab4.5_0005342g0010 Nicotiana tabacum HOM05D006533 ORTHO05D008625 1.5e-167 593.2 457 70.5
Cc02_g00290 Coffea canephora HOM05D006533 ORTHO05D008625 2.6e-159 565.8 420 71.2
MSTRG.8576 Avicennia marina HOM05D006533 ORTHO05D008625 2.4e-157 559.3 410 69.5
Migut.F00098 Erythranthe guttata HOM05D006533 ORTHO05D008625 4.6e-156 555.1 409 69.2
Oeu060384.1 Olea europaea HOM05D006533 ORTHO05D008625 1.5e-154 550.1 411 70.3
QL09p024067 Quercus lobata HOM05D006533 ORTHO05D008625 6.2e-153 544.7 412 68.4
GSVIVG01024411001 Vitis vinifera HOM05D006533 ORTHO05D008625 9.9e-151 537.3 421 65.1
CiPaw.06G033000 Carya illinoinensis HOM05D006533 ORTHO05D008625 1.3e-150 537.0 414 66.9
ECA232G2080 Erigeron canadensis HOM05D006533 ORTHO05D008625 1.7e-150 536.6 425 67.3
Actinidia34305 Actinidia chinensis HOM05D006533 ORTHO05D008625 2.9e-150 535.8 389 69.4
SGA_v2.0_scaffold18G08508 Striga asiatica HOM05D006533 ORTHO05D008625 1.4e-149 533.5 413 66.6
FvH4_7g33920 Fragaria vesca HOM05D006533 ORTHO05D008625 1.6e-148 530.0 406 66.0
FAN10G3989 Fragaria x ananassa HOM05D006533 ORTHO05D008625 2.7e-148 529.3 407 66.3
RcHm_v2.0_Chr1g0384131 Rosa chinensis HOM05D006533 ORTHO05D008625 6.6e-147 524.6 406 65.8
FAN03G0602 Fragaria x ananassa HOM05D006533 ORTHO05D008625 1.1e-146 523.9 394 66.5
CANSAT56G1022 Cannabis sativa HOM05D006533 ORTHO05D008625 1.6e-145 520.0 417 63.8
CANSAT56G3916 Cannabis sativa HOM05D006533 ORTHO05D008625 2.8e-145 519.2 417 63.5
Thecc.01G135900 Theobroma cacao HOM05D006533 ORTHO05D008625 4.0e-144 515.4 410 64.4
MD07G1308500 Malus domestica HOM05D006533 ORTHO05D008625 1.2e-143 513.8 410 65.4
Potri.013G082000 Populus trichocarpa HOM05D006533 ORTHO05D008625 1.2e-143 513.8 412 64.1
Sabra13G0070900 Salix brachista HOM05D006533 ORTHO05D008625 1.2e-143 513.8 412 64.1
Prupe.2G325700 Prunus persica HOM05D006533 ORTHO05D008625 2.6e-143 512.7 416 65.1
Sed0002742 Sechium edule HOM05D006533 ORTHO05D008625 2.6e-143 512.7 394 65.7
Eucgr.K00088 Eucalyptus grandis HOM05D006533 ORTHO05D008625 7.6e-143 511.1 400 66.2
Gohir.A09G004900 Gossypium hirsutum HOM05D006533 ORTHO05D008625 1.3e-142 510.4 410 64.1
Gohir.D09G004200 Gossypium hirsutum HOM05D006533 ORTHO05D008625 1.7e-142 510.0 410 64.1
Gorai.006G005800 Gossypium raimondii HOM05D006533 ORTHO05D008625 1.7e-142 510.0 410 64.1
Lsat_1_v5_gn_9_47461 Lactuca sativa HOM05D006533 ORTHO05D008625 1.7e-142 510.0 396 66.9
AUR62002060 Chenopodium quinoa HOM05D006533 ORTHO05D008625 2.2e-142 509.6 419 64.2
Glyma.01G228300 Glycine max HOM05D006533 ORTHO05D008625 4.9e-142 508.4 395 66.3
AUR62028174 Chenopodium quinoa HOM05D006533 ORTHO05D008625 1.2e-140 503.8 421 64.6
Lj6g0021866 Lotus japonicus HOM05D006533 ORTHO05D008625 1.2e-140 503.8 392 65.6
Lalb_Chr09g0320221 Lupinus albus HOM05D006533 ORTHO05D008625 8.7e-139 497.7 393 65.6
CsaV3_3G015700 Cucumis sativus L. HOM05D006533 ORTHO05D008625 1.1e-138 497.3 414 62.3
Phvul.002G039600 Phaseolus vulgaris HOM05D006533 ORTHO05D008625 1.9e-138 496.5 392 65.1
ClCG05G007010 Citrullus lanatus HOM05D006533 ORTHO05D008625 3.3e-138 495.7 414 62.1
CSS0012834 Camellia sinensis var. sinensis HOM05D006533 ORTHO05D008625 5.6e-138 495.0 391 66.2
Glyma.11G011100 Glycine max HOM05D006533 ORTHO05D008625 5.6e-138 495.0 395 64.3
Ciclev10020455m.g Citrus clementina HOM05D006533 ORTHO05D008625 1.6e-137 493.4 412 65.3
Atru.chr1.2781 Acer truncatum HOM05D006533 ORTHO05D008625 2.1e-137 493.0 405 64.4
Lj3A887G72 Lonicera japonica HOM05D006533 ORTHO05D008625 4.7e-137 491.9 403 63.0
PGR142G1840 Punica granatum HOM05D006533 ORTHO05D008625 1.4e-136 490.3 411 62.0
Ca_24442_v3 Cicer arietinum L. HOM05D006533 ORTHO05D008625 6.9e-136 488.0 392 64.8
HanXRQChr05g0141721 Helianthus annuus HOM05D006533 ORTHO05D008625 2.6e-135 486.1 410 62.7
arahy.Tifrunner.gnm1.ann1.NII7HE Arachis hypogaea HOM05D006533 ORTHO05D008625 3.4e-135 485.7 399 63.4
Medtr5g007700 Medicago truncatula HOM05D006533 ORTHO05D008625 7.6e-135 484.6 392 63.0
Manes.09G124800 Manihot esculenta HOM05D006533 ORTHO05D008625 1.3e-134 483.8 409 60.9
THA.LOC104820882 Tarenaya hassleriana HOM05D006533 ORTHO05D008625 1.7e-134 483.4 410 62.2
VMungo1215G1087 Vigna mungo HOM05D006533 ORTHO05D008625 3.5e-132 475.7 369 65.6
Psat2g188880 Pisum sativum HOM05D006533 ORTHO05D008625 6.0e-132 474.9 390 63.6
arahy.Tifrunner.gnm1.ann1.YJZS8S Arachis hypogaea HOM05D006533 ORTHO05D008625 5.1e-131 471.9 425 60.2
CARHR196200 Cardamine hirsuta HOM05D006533 ORTHO05D008625 8.7e-131 471.1 410 61.0
AL6G27960 Arabidopsis lyrata HOM05D006533 ORTHO05D008625 1.9e-130 469.9 410 61.5
Cpa.g.sc39.72 Carica papaya HOM05D006533 ORTHO05D008625 1.9e-130 469.9 387 64.3
vmacro06509 Vaccinium macrocarpon HOM05D006533 ORTHO05D008625 2.5e-130 469.5 392 63.8
Ah.04g156530 Amaranthus hybridus HOM05D006533 ORTHO05D008625 3.3e-130 469.2 386 64.5
EL10Ac3g05080 Beta vulgaris HOM05D006533 ORTHO05D008625 7.3e-130 468.0 427 58.5
Aa31LG11G12640 Aethionema arabicum HOM05D006533 ORTHO05D008625 1.3e-129 467.2 410 60.0
Cfa006012 Carpinus fangiana HOM05D006533 ORTHO05D008625 8.1e-129 464.5 414 61.1
unitig_0.g2430 Utricularia gibba HOM05D006533 ORTHO05D008625 3.1e-128 462.6 405 60.0
Duzib264G0907 Durio zibethinus HOM05D006533 ORTHO05D008625 1.2e-127 460.7 410 59.5
SalBow4G2334 Salvia bowleyana HOM05D006533 ORTHO05D008625 2.0e-127 459.9 413 61.0
PSO063G2320 Papaver somniferum HOM05D006533 ORTHO05D008625 2.6e-127 459.5 391 59.8
Aqoxy3G02101 Aquilegia oxysepala HOM05D006533 ORTHO05D008625 9.9e-127 457.6 420 58.6
Sabra06G0125800 Salix brachista HOM05D006533 ORTHO05D008625 9.9e-127 457.6 412 59.0
Sc06g0002540 Simmondsia chinensis HOM05D006533 ORTHO05D008625 2.2e-126 456.4 394 61.2
Hma1.2p1_3802F.1_g337635 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.9e-126 455.3 337 68.8
TAR374G0999 Trochodendron aralioides HOM05D006533 ORTHO05D008625 6.7e-123 444.9 415 58.3
Hund09790 Selenicereus undatus HOM05D006533 ORTHO05D008625 3.3e-122 442.6 416 57.5
DCAR_009009 Daucus carota HOM05D006533 ORTHO05D008625 4.3e-122 442.2 354 66.9
COL.COLO4_35796 Corchorus olitorius HOM05D006533 ORTHO05D008625 7.4e-122 441.4 405 56.5
Medtr5g061700 Medicago truncatula HOM05D006533 ORTHO05D008625 7.4e-122 441.4 397 60.2
Dinv17259 Davidia involucrata HOM05D006533 ORTHO05D008625 9.0e-120 434.5 312 71.5
LjContig00222g0024674 Lotus japonicus HOM05D006533 ORTHO05D008625 3.4e-119 432.6 342 65.8
ATR0829G094 Amborella trichopoda HOM05D006533 ORTHO05D008625 6.4e-118 428.3 425 53.4
MELO3C006767.2 Cucumis melo HOM05D006533 ORTHO05D008625 8.4e-118 427.9 428 55.4
PSO782G0079 Papaver somniferum HOM05D006533 ORTHO05D008625 8.4e-118 427.9 388 58.2
HPP92_005443 Vanilla planifolia HOM05D006533 ORTHO05D008625 3.9e-115 419.1 390 54.9
Nn1g01934 Nelumbo nucifera HOM05D006533 ORTHO05D008625 1.9e-114 416.8 416 54.8
MBI04_g36026_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 4.9e-110 402.1 394 53.8
Rhsim03G0221300 Rhododendron simsii HOM05D006533 ORTHO05D008625 3.2e-109 399.4 434 54.1
SalBow4G1971 Salvia bowleyana HOM05D006533 ORTHO05D008625 1.6e-105 387.1 363 60.3
Os06g0114600 Oryza sativa ssp. japonica HOM05D006533 ORTHO05D008625 3.7e-105 386.0 351 55.0
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 6.1e-100 368.6 362 55.2
Hma1.2p1_0758F.1_g213747 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.3e-97 360.9 331 60.1
Mapoly0015s0191 Marchantia polymorpha HOM05D006533 ORTHO05D008625 1.4e-96 357.5 467 42.4
Hma1.2p1_0758F.1_g213741 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.6e-95 353.2 338 58.3
Hma1.2p1_0758F.1_g213730 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 4.5e-95 352.4 340 57.9
Zm00001eb268960 Zea mays HOM05D006533 ORTHO05D008625 6.5e-94 348.6 322 54.0
Hma1.2p1_0758F.1_g213704 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 7.2e-93 345.1 298 62.1
SMO340G0278 Selaginella moellendorffii HOM05D006533 ORTHO05D008625 1.0e-91 341.3 395 46.3
Hma1.2p1_0758F.1_g213725 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.4e-91 340.9 298 61.4
Hma1.2p1_0758F.1_g213746 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.4e-91 340.9 298 61.4
Hma1.2p1_3802F.1_g337637 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 1.4e-91 340.9 298 61.4
Pp3c15_5730 Physcomitrium patens HOM05D006533 ORTHO05D008625 4.4e-90 335.9 420 43.3
Psat2g075360 Pisum sativum HOM05D006533 ORTHO05D008625 5.7e-82 308.9 293 57.7
TPR.G22023 Trifolium pratense HOM05D006533 ORTHO05D008625 6.3e-81 305.4 205 74.1
QL09p024429 Quercus lobata HOM05D006533 ORTHO05D008625 8.5e-78 295.0 286 57.0
arahy.Tifrunner.gnm1.ann1.1W8L1U Arachis hypogaea HOM05D006533 ORTHO05D008625 1.1e-69 268.1 187 72.7
SEGI_31434 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 3.6e-68 263.1 245 57.6
TPR.G37965 Trifolium pratense HOM05D006533 ORTHO05D008625 1.8e-67 260.8 271 52.8
CBR_g24301 Chara braunii HOM05D006533 ORTHO05D008625 1.6e-52 211.1 348 38.2
HPP92_005432 Vanilla planifolia HOM05D006533 ORTHO05D008625 6.4e-33 146.0 178 44.9
FAN01G0029 Fragaria x ananassa HOM05D006533 ORTHO05D008625 8.6e-30 135.6 80 78.8
MBI06_g38701_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.2e-28 131.7 134 50.7
SEGI_03149 Sequoiadendron giganteum HOM05D006533 ORTHO05D008625 5.2e-27 126.3 207 38.2
MBI06_g38702_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 4.3e-21 106.7 119 48.7
MBI12_g01582_MAGBIO Magnolia biondii HOM05D006533 ORTHO05D008625 1.1e-19 102.1 158 34.8
Hma1.2p1_0649F.1_g195356 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.5e-13 80.9 74 67.6
Hma1.2p1_0649F.1_g195390 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.5e-13 80.9 74 67.6
Hma1.2p1_3802F.1_g337632 Hydrangea macrophylla HOM05D006533 ORTHO05D008625 2.5e-13 80.9 74 67.6
Rhsim12G0119200 Rhododendron simsii HOM05D006533 ORTHO05D338813 8.4e-09 65.9 59 57.6
MBI05_g26894_MAGBIO Magnolia biondii HOM05D003110 ORTHO05D003585 7.1e-08 62.8 47 57.4
Haze_04836 Corylus avellana HOM05D006533 ORTHO05D008625 3.0e-06 57.4 60 56.7


User provided reference genes

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