Gene: Solyc02g093490.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g093490.3
  • Transcript Identifier Solyc02g093490.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 52402332-52406145 : positive

Gene Family Information

  • ID HOM05D001715
  • #Genes/#Species 378/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g093490.3.1
  • uniprot A0A3Q7FDZ4
  • gene_id Solyc02g093490

Descriptions

  • Description SGF29 tudor-like domain-containing protein (AHRD V3.3 *** A0A2U1MEF8_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043966
IBA
GOA Databasehistone H3 acetylation
GO:0043967
ISO
PLAZA Integrative Orthologyhistone H4 acetylation AT5G40550
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G40550

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035064
IBA
GOA Databasemethylated histone binding
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D001715

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000124
IBA
IEA
GOA DatabaseSAGA complex
GO:0000124
IEA
InterProSAGA complex
GO:0005634
IEA
GOA Databasenucleus
GO:0005671
IBA
GOA DatabaseAda2/Gcn5/Ada3 transcription activator complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010750 SGF29 tudor-like domain
IPR037802 SAGA-associated factor 29
Mapman id Description
15.3.4.3.1.4 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.SAGA complex.HAT histone acetyltransferase module.component SGF29