Gene: Solyc02g089280.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g089280.3
  • Transcript Identifier Solyc02g089280.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 49199376-49201443 : negative

Gene Family Information

  • ID HOM05D004464
  • #Genes/#Species 161/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g089280.3.1
  • uniprot A0A3Q7FXD5
  • gene_id Solyc02g089280

Descriptions

  • Description 40S ribosomal protein S9-2 (AHRD V3.3 *** A0A2I0VJL8_9ASPA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IBA
GOA DatabaserRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019843
IEA
GOA DatabaserRNA binding
GO:0019843
IEA
InterProrRNA binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IEA
InterProRNA binding
GO:0030515
IBA
GOA DatabasesnoRNA binding
GO:0003735
ISO
PLAZA Integrative Orthologystructural constituent of ribosome AT5G15750

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
GOA Databaseribosome
GO:0034457
IBA
GOA DatabaseMpp10 complex
GO:0032040
IBA
GOA Databasesmall-subunit processome
GO:0022627
ISO
PLAZA Integrative Orthologycytosolic small ribosomal subunit AT5G15750

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001912 Ribosomal protein S4/S9, N-terminal
IPR022801 Ribosomal protein S4/S9
IPR002942 RNA-binding S4 domain
IPR036986 RNA-binding S4 domain superfamily
Mapman id Description
17.1.3.2.1.1.1 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.MPP10 module.assembly factor (Imp3)