Gene: Solyc02g086850.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g086850.3
  • Transcript Identifier Solyc02g086850.3.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 47470947-47473086 : positive

Gene Family Information

  • ID HOM05D001511
  • #Genes/#Species 419/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g086850.3.1
  • uniprot A0A3Q7FVZ8
  • gene_id Solyc02g086850

Descriptions

  • Description Exonuclease family protein (AHRD V3.3 *** A0A2U1PL29_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006364
IEA
GOA DatabaserRNA processing
GO:0006364
IEA
InterProrRNA processing
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0008408
IEA
GOA Database3'-5' exonuclease activity
GO:0008408
IEA
InterPro3'-5' exonuclease activity
GO:0004527
IBA
GOA Databaseexonuclease activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036397 Ribonuclease H superfamily
IPR037431 RNA exonuclease 4, DEDDh 3'-5' exonuclease domain
IPR013520 Exonuclease, RNase T/DNA polymerase III
IPR012337 Ribonuclease H-like superfamily
Mapman id Description
35.1 not assigned.annotated