Gene: Solyc02g065500.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g065500.4
  • Transcript Identifier Solyc02g065500.4.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 34692633-34706012 : negative

Gene Family Information

  • ID HOM05D003876
  • #Genes/#Species 179/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g065500.4.1
  • uniprot A0A3Q7FKT9
  • gene_id Solyc02g065500

Descriptions

  • Description ribosome 60S biogenesis amino-terminal protein (AHRD V3.3 *** AT4G27010.1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000463
IBA
GOA Databasematuration of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466
IBA
GOA Databasematuration of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0031935
ISO
PLAZA Integrative Orthologyregulation of chromatin silencing AT1G72270
GO:0080111
ISO
PLAZA Integrative OrthologyDNA demethylation AT1G72270

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G72270

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IBA
GOA Databasenucleolus
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G72270
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G72270
GO:0000123
ISO
PLAZA Integrative Orthologyhistone acetyltransferase complex AT1G72270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039844 Nucleolar pre-ribosomal-associated protein 1
IPR032436 Nucleolar pre-ribosomal-associated protein 1, C-terminal domain
Mapman id Description
35.1 not assigned.annotated