Gene: AT1G72270

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G72270
  • Transcript Identifier AT1G72270.1
  • Gene Type Coding gene
  • Location Chr1 : 27199733-27209027 : negative

Gene Family Information

  • ID HOM05D003876
  • #Genes/#Species 179/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G72270.1
  • uniprot F4IBR2

Descriptions

  • Description nucleolar pre-ribosomal-associated protein
  • Computational description CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27010.1); Has 772 Blast hits to 657 proteins in 120 species: Archae - 0; Bacteria - 0; Metazoa - 344; Fungi - 94; Plants - 322; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031935
IMP
Gene Ontologyregulation of chromatin silencing1
GO:0080111
IMP
Gene OntologyDNA demethylation1
GO:0000463
IBA
Gene Ontologymaturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2
GO:0000466
IBA
Gene Ontologymaturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
ISM
Gene Ontologynucleus1
GO:0005739
IDA
GOA Databasemitochondrion
GO:0005739
HDA
Gene Ontologymitochondrion3
GO:0000123
IDA
Gene Ontologyhistone acetyltransferase complex4
GO:0005730
IBA
Gene Ontologynucleolus2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039844 Nucleolar pre-ribosomal-associated protein 1
IPR021714 Nucleolar pre-ribosomal-associated protein 1, N-terminal
IPR032436 Nucleolar pre-ribosomal-associated protein 1, C-terminal domain
Mapman id Description
12.5.3.2.4 Chromatin organisation.DNA methylation.ROS1-mediated DNA demethylation.ROS1-recruitment complex.transposon-derived factor HDP1