Gene: Solyc01g112010.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc01g112010.3
- Transcript Identifier Solyc01g112010.3.1
- Gene Type Coding gene
- Location SL4.0ch01 : 90490063-90491944 : negative
Gene Family Information
- ID HOM05D005088
- #Genes/#Species 147/92
- Phylogenetic origin
- ID ORTHO05D006914
- #Genes/#Species 136/92
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc01g112010.3.1
- uniprot A0A3Q7EUH9
- gene_id Solyc01g112010
Descriptions
- Description RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *** AT3G56510.5)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0034462 | IBA | GOA Database | small-subunit processome assembly | |
| GO:0000447 | IBA | GOA Database | endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | |
| GO:0000472 | IBA | GOA Database | endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | |
| GO:0000480 | IBA | GOA Database | endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IBA | GOA Database | RNA binding | |
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D005088 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | IBA | GOA Database | nucleolus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR039119 | ABT1/Esf2 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |