Gene: Solyc01g106710.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g106710.1
  • Transcript Identifier Solyc01g106710.1.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 86777208-86777873 : negative

Gene Family Information

  • ID HOM05D000203
  • #Genes/#Species 1948/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g106710.1.1
  • uniprot A0A3Q7ERV0
  • gene_id Solyc01g106710

Descriptions

  • Description Transcription factor, MADS-box (AHRD V3.3 *** A0A2U1P6T8_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045944
IEA
GOA Databasepositive regulation of transcription by RNA polymerase II
GO:0045944
IEA
InterPropositive regulation of transcription by RNA polymerase II
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0009559
ISO
PLAZA Integrative Orthologyembryo sac central cell differentiation AT2G24840
GO:0009911
ISO
PLAZA Integrative Orthologypositive regulation of flower development AT1G01530

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000977
IEA
GOA DatabaseRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000977
IEA
InterProRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0000981
IBA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000978
IBA
GOA DatabaseRNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G24840

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0043078
ISO
PLAZA Integrative Orthologypolar nucleus AT2G24840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033896 MADS MEF2-like
IPR036879 Transcription factor, MADS-box superfamily
IPR002100 Transcription factor, MADS-box
Mapman id Description
15.3.4.4.1.6 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.MEDIATOR complex.head module.component MED19
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)