Gene: Solyc01g106030.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g106030.4
  • Transcript Identifier Solyc01g106030.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 86336251-86342609 : positive

Gene Family Information

  • ID HOM05D001232
  • #Genes/#Species 504/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g106030.4.1
  • uniprot A0A3Q7FBQ2
  • gene_id Solyc01g106030

Descriptions

  • Description GATA transcription factor 28 (AHRD V3.3 *** A0A2G3AWS2_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT4G24470

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0043565
IEA
GOA Databasesequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT3G21175
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G21175

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR010402 CCT domain
IPR000679 Zinc finger, GATA-type
IPR010399 Tify domain
IPR013088 Zinc finger, NHR/GATA-type
Mapman id Description
15.5.1.3.2 RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.GATA trancription factor families.transcription factor (C-GATA)