Gene: AT3G21175

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G21175
  • Transcript Identifier AT3G21175.2
  • Gene Type Coding gene
  • Location Chr3 : 7422832-7424598 : positive

Gene Family Information

  • ID HOM05D001232
  • #Genes/#Species 504/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G21175.2
  • symbol ZML1
  • Alias GATA24,GATA TRANSCRIPTION FACTOR 24,TIFY2B
  • uniprot Q8GXL7

Descriptions

  • Description ZIM-like 1
  • Computational description ZIM-like 1 (ZML1); FUNCTIONS IN: sequence-specific DNA binding, sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2); Has 2137 Blast hits to 2132 proteins in 202 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 496; Plants - 1587; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).
  • Computational description ZIM-like 1 (ZML1); FUNCTIONS IN: sequence-specific DNA binding, zinc ion binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Tify (InterPro:IPR010399), Zinc finger, GATA-type (InterPro:IPR000679), CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2); Has 2151 Blast hits to 2146 proteins in 203 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 499; Plants - 1598; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
Gene Ontologyregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0005515
IEA
InterProprotein binding
GO:0042802
IPI
Gene Ontologyidentical protein binding1
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding2
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0043565
IEA
GOA Databasesequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000679 Zinc finger, GATA-type
IPR013088 Zinc finger, NHR/GATA-type
IPR010399 Tify domain
IPR010402 CCT domain
Mapman id Description
15.5.1.3.2 RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.GATA trancription factor families.transcription factor (C-GATA)