Gene: AT4G24470

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G24470
  • Transcript Identifier AT4G24470.2
  • Gene Type Coding gene
  • Location Chr4 : 12645785-12647734 : positive

Gene Family Information

  • ID HOM05D001232
  • #Genes/#Species 504/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G24470.2
  • symbol ZIM
  • Alias AtTIFY1,GATA25,GATA TRANSCRIPTION FACTOR 25,TIFY1
  • full_name Zinc-finger protein expressed in Inflorescence Meristem
  • uniprot Q9LRH6

Descriptions

  • Description GATA-type zinc finger protein with TIFY domain-containing protein
  • Computational description TIFY1; CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2); Has 1524 Blast hits to 1503 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 21; Fungi - 686; Plants - 776; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).
  • Computational description Zinc-finger protein expressed in Inflorescence Meristem (ZIM); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Tify (InterPro:IPR010399), CCT domain (InterPro:IPR010402), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: ZIM-LIKE 2 (TAIR:AT1G51600.2); Has 1524 Blast hits to 1503 proteins in 175 species: Archae - 0; Bacteria - 0; Metazoa - 21; Fungi - 686; Plants - 776; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IMP
IEA
Gene Ontologyregulation of transcription, DNA-templated1
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0007623
IEP
Gene Ontologycircadian rhythm2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0005515
IEA
InterProprotein binding
GO:0043565
IEA
Gene Ontologysequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0042802
IPI
Gene Ontologyidentical protein binding4
GO:0000976
IPI
Gene Ontologytranscription cis-regulatory region binding5
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity6

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus7

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010402 CCT domain
IPR000679 Zinc finger, GATA-type
IPR010399 Tify domain
IPR013088 Zinc finger, NHR/GATA-type
Mapman id Description
15.5.1.3.2 RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.GATA trancription factor families.transcription factor (C-GATA)