Gene: Solyc01g104920.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc01g104920.3
- Transcript Identifier Solyc01g104920.3.1
- Gene Type Coding gene
- Location SL4.0ch01 : 85551832-85559880 : negative
Gene Family Information
- ID HOM05D002724
- #Genes/#Species 253/96
- Phylogenetic origin
- ID ORTHO05D002995
- #Genes/#Species 250/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc01g104920.3.1
- uniprot A0A3Q7FAZ1
- gene_id Solyc01g104920
Descriptions
- Description Vesicle-fusing ATPase (AHRD V3.3 *** A0A2G3C862_CAPCH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0043001 | IBA | GOA Database | Golgi to plasma membrane protein transport | |
GO:0051028 | ISO | PLAZA Integrative Orthology | mRNA transport | Os05g0519400 |
GO:1990019 | ISO | PLAZA Integrative Orthology | protein storage vacuole organization | Os05g0519400 |
GO:0007030 | ISO | PLAZA Integrative Orthology | Golgi organization | AT4G04910 |
GO:0006891 | IBA | GOA Database | intra-Golgi vesicle-mediated transport | |
GO:0048211 | IBA | GOA Database | Golgi vesicle docking | |
GO:0035494 | IEA | GOA Database | SNARE complex disassembly | |
GO:0035494 | IEA | InterPro | SNARE complex disassembly | |
GO:0016192 | IEA | GOA Database | vesicle-mediated transport | |
GO:0015031 | IEA | GOA Database | protein transport |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G04910 |
GO:0016887 | IEA | InterPro | ATP hydrolysis activity | |
GO:0016787 | IEA | GOA Database | hydrolase activity | |
GO:0000166 | IEA | GOA Database | nucleotide binding | |
GO:0005524 | IEA | GOA Database | ATP binding | |
GO:0005524 | IEA | InterPro | ATP binding | |
GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT4G04910 |
GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT4G04910 |
GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT4G04910 |
GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT4G04910 |
GO:0005795 | IBA | GOA Database | Golgi stack | |
GO:0005737 | IEA | GOA Database | cytoplasm |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
IPR039812 | Vesicle-fusing ATPase |
IPR041569 | AAA ATPase, AAA+ lid domain |
IPR029067 | CDC48 domain 2-like superfamily |
IPR003593 | AAA+ ATPase domain |
IPR009010 | Aspartate decarboxylase-like domain superfamily |
IPR003959 | ATPase, AAA-type, core |
Mapman id | Description |
---|---|
22.3.5.2.4 | Vesicle trafficking.post-Golgi trafficking.target membrane fusion.regulation.regulatory ATPase (NSF/SEC18) |